CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

DAPPUDRAFT_331337 *(Daphnia pulex)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	DAPPUDRAFT_331337	T085408_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
hkb M03710_2.00	Drosophila melanogaster	VTCACGCCYHHN	NDDRGGCGTGAB	SELEX Nitta et al.(2015) hkb_1	0.760	0.783
hkb M06470_2.00	Drosophila melanogaster	TCACGCCYM	KRGGCGTGA	B1H Mathelier et al.(2014) MA0450.1	0.760	0.783
hkb M06168_2.00	Drosophila melanogaster	TCACGCCYM	KRGGCGTGA	B1H Zhu et al.(2011) hkb_NAR_FBgn0001204	0.760	0.783
hkb M09666_2.00	Drosophila melanogaster	YMACGCCCMY	RKGGGCGTKR	Misc Kulakovskiy et al.(2009) hkb	0.760	0.783
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
EFX67180	C2H2 ZF	258	280	FRCPHCQVAFSNNGQLKGHVRSH
EFX67180	C2H2 ZF	286	310	FKCDEESCGKTFTRNEELTRHKRIH
EFX67180	C2H2 ZF	316	338	FSCAVCCKRFGRRDHLKKHSRIH

Links
Other C2H2 ZF family TFs
Other *Daphnia pulex* TFs