CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART04G29560
(
Oryza barthii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OBART04G29560
T019999_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART04G29560.1
B3
422
523
LRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVTLKMDDFKFETTWNFKYRFWPNNKSRMYVLESTGGFVKHHGLQTGDIFIIYKSSESGKFVVRGEKA
OBART04G29560.2
B3
280
381
LRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVTLKMDDFKFETTWNFKYRFWPNNKSRMYVLESTGGFVKHHGLQTGDIFIIYKSSESGKFVVRGEKA
Links
Other
B3
family TFs
Other
Oryza barthii
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM04G29470
Oryza glumaepatula
OGLUM04G29470
N
1.000
ORUFI04G31260
Oryza rufipogon
ORUFI04G31260
N
1.000
OS04G0676650
Oryza sativa
OS04G0676650
N
1.000
OPUNC04G27120
Oryza punctata
OPUNC04G27120
N
0.990
ORGLA04G0258600
Oryza glaberrima
ORGLA04G0258600
N
0.968
BGIOSGA014094
Oryza indica
BGIOSGA014094
N
0.948
OBART04G29550
Oryza barthii
OBART04G29550
N
0.948
OGLUM04G29460
Oryza glumaepatula
OGLUM04G29460
N
0.948
ONIVA04G28090
Oryza nivara
ONIVA04G28090
N
0.948
ORGLA04G0258500
Oryza glaberrima
ORGLA04G0258500
N
0.948
OS04G0676600
Oryza sativa
OS04G0676600
N
0.948
OMERI04G24970
Oryza meridionalis
OMERI04G24970
N
0.938
ORGLA03G0402000
Oryza glaberrima
ORGLA03G0402000
N
0.938
OB04G36540
Oryza brachyantha
OB04G36540
N
0.918
LPERR04G04010
Leersia perrieri
LPERR04G04010
N
0.897
OPUNC04G27110
Oryza punctata
OPUNC04G27110
N
0.897
BGIOSGA014093
Oryza indica
BGIOSGA014093
N
0.895
OMERI04G24980
Oryza meridionalis
OMERI04G24980
N
0.844
LPERR02G09050
Leersia perrieri
LPERR02G09050
N
0.814
BRADI5G26100
Brachypodium distachyon
BRADI5G26100
N
0.773
Traes_2AL_B518C11E4
Triticum aestivum
Traes_2AL_B518C11E4
N
0.760
MLOC_50915
Hordeum vulgare
MLOC_50915
N
0.742