ENSAMEG00000011243 (Ailuropoda melanoleuca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMEG00000011243 T086851_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN1
M05847_2.00 		Homo sapiens
NNNCCTACTAHGH
DCDTAGTAGGNNN		 SMiLE-seq
Isakova et al.(2017)
ZKSCAN1 		0.827 1.000
ZKSCAN1
M08874_2.00 		Homo sapiens
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH		 Misc
Kulakovskiy et al.(2013)
ZKSC1_HUMAN.H11MO.0.B 		0.827 1.000
Zkscan1
M00771_2.00 		Mus musculus
NNNHDHDNNN
NNNHDHDNNN		 PBM
Weirauch et al.(2013)
pTH2280 		0.825 0.993
Zkscan1
M08985_2.00 		Mus musculus
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH		 Misc
Kulakovskiy et al.(2013)
ZKSC1_MOUSE.H11MO.0.A 		0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000011824 C2H2 ZF 377 399
ENSAMEP00000011824 C2H2 ZF 405 427
ENSAMEP00000011824 C2H2 ZF 433 455
ENSAMEP00000011824 C2H2 ZF 461 483
ENSAMEP00000011824 C2H2 ZF 489 511
ENSAMEP00000011824 C2H2 ZF 517 539

Links

Other C2H2 ZF family TFs
Other Ailuropoda melanoleuca TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R002527 Aptenodytes forsteri Afo_R002527 N
ENSPPYG00000011103 Pongo abelii ENSPPYG00000011103 N
ENSPSIG00000011898 Pelodiscus sinensis ENSPSIG00000011898 N
NCOA3 Pan troglodytes ENSPTRG00000013592 N
NCOA3 Sorex araneus ENSSARG00000005155 N
NCOA3 Taeniopygia guttata ENSTGUG00000008993 N
NCOA3 Takifugu rubripes ENSTRUG00000004450 N
ENSXMAG00000017470 Xiphophorus maculatus ENSXMAG00000017470 N
Aan_R015846 Calypte anna Aan_R015846 N
ENSPANG00000001325 Papio anubis ENSPANG00000001325 N
Brh_R004714 Buceros rhinoceros Brh_R004714 N
Cmyd_10017429 Chelonia mydas Cmyd_10017429 N
ENSMMUP00000015773 Macaca fascicularis ENSMMUP00000015773 N
Gfo_R009610 Geospiza fortis Gfo_R009610 N
Tal_R011643 Tyto alba Tal_R011643 N
ncoa3 Xenopus tropicalis XB-GENE-486618 N
ncoa3.S Xenopus laevis XB-GENE-865628 N
XP_002933204 Xenopus tropicalis XP_002933204 N
ENSGMOG00000014139 Gadus morhua ENSGMOG00000014139 N
ENSAMXG00000008788 Astyanax mexicanus ENSAMXG00000008788 N
NCOA3 Callithrix jacchus ENSCJAG00000016602 N
ENSCSAG00000014910 Chlorocebus sabaeus ENSCSAG00000014910 N
ENSFALG00000012895 Ficedula albicollis ENSFALG00000012895 N
NCOA3 Homo sapiens ENSG00000124151 N
NCOA3 Gasterosteus aculeatus ENSGACG00000015221 N
NCOA3 Gallus gallus ENSGALG00000004570 N
ENSGGOG00000025131 Gorilla gorilla ENSGGOG00000025131 N
NCOA3 Anolis carolinensis ENSACAG00000016334 N
ENSLACG00000006885 Latimeria chalumnae ENSLACG00000006885 N
NCOA3 Meleagris gallopavo ENSMGAG00000004414 N
NCOA3 Microcebus murinus ENSMICG00000006798 N
NCOA3 Macaca mulatta ENSMMUG00000012020 N
ENSNLEG00000006923 Nomascus leucogenys ENSNLEG00000006923 N
NCOA3 Ornithorhynchus anatinus ENSOANG00000012027 N
ENSONIG00000017075 Oreochromis niloticus ENSONIG00000017075 N
NCOA3 Oryzias latipes ENSORLG00000012143 N