SNAI2 (Bos taurus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSBTAG00000013227 T087876_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.815 0.965
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.815 0.965
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.815 0.965
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.815 0.965
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.815 0.965
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.815 0.965
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.815 0.965
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.815 0.965
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.815 0.965
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.815 0.965
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.815 0.965
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.815 0.965
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.811 0.956
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.769 0.825
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000017600 C2H2 ZF 128 150
ENSBTAP00000017600 C2H2 ZF 159 181
ENSBTAP00000017600 C2H2 ZF 185 207
ENSBTAP00000017600 C2H2 ZF 213 235
ENSBTAP00000017600 C2H2 ZF 241 262

Links

Other C2H2 ZF family TFs
Other Bos taurus TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zfx Mus musculus ENSMUSG00000079509 D 0.000
ZFX Homo sapiens ENSG00000005889 D 0.000
ENSOARG00000017137 Ovis aries ENSOARG00000017137 I 0.000
ENSNLEG00000010044 Nomascus leucogenys ENSNLEG00000010044 I 0.000
ZFX Oryctolagus cuniculus ENSOCUG00000003815 I 0.000
ENSPANG00000000982 Papio anubis ENSPANG00000000982 I 0.000
ENSPPYG00000020195 Pongo abelii ENSPPYG00000020195 I 0.000
ZFX Pan troglodytes ENSPTRG00000021747 I 0.000
ZFY Pan troglodytes ENSPTRG00000022471 I 0.000
ZFX Pteropus vampyrus ENSPVAG00000002534 I 0.000
Zfx Rattus norvegicus ENSRNOG00000005624 I 0.000
ENSSHAG00000004983 Sarcophilus harrisii ENSSHAG00000004983 I 0.000
ENSSSCG00000012179 Sus scrofa ENSSSCG00000012179 I 0.000
ENSSSCG00000021322 Sus scrofa ENSSSCG00000021322 I 0.000
ENSTSYG00000005088 Tarsius syrichta ENSTSYG00000005088 I 0.000
ZFX Tursiops truncatus ENSTTRG00000012488 I 0.000
ENSBTAP00000010165-D1 Bos grunniens ENSBTAP00000010165-D1 I 0.000
ENSP00000304985 Macaca fascicularis ENSP00000304985 I 0.000
Myotis_brandtii_ZFX_10010226 Myotis brandtii Myotis_brandtii_ZFX_10010226 I 0.000
Ogr18022 Ophisaurus gracilis Ogr18022 I 0.000
Pvit_09540 Pogona vitticeps Pvit_09540 I 0.000
ZFY Homo sapiens ENSG00000067646 I 0.000
ENSAMEG00000012681 Ailuropoda melanoleuca ENSAMEG00000012681 I 0.000
ZFY Bos taurus ENSBTAG00000007730 I 0.000
ZFX Canis familiaris ENSCAFG00000013408 I 0.000
ZFX Callithrix jacchus ENSCJAG00000004841 I 0.000
ENSCPOG00000011739 Cavia porcellus ENSCPOG00000011739 I 0.000
ENSCSAG00000018321 Chlorocebus sabaeus ENSCSAG00000018321 I 0.000
ZFX Dasypus novemcinctus ENSDNOG00000034569 I 0.000
ZFX Equus caballus ENSECAG00000025018 I 0.000
ZFX Felis catus ENSFCAG00000010544 I 0.000
ZFX Ornithorhynchus anatinus ENSOANG00000011502 I 0.000
ZFX Gorilla gorilla ENSGGOG00000004053 I 0.000
ZFX Loxodonta africana ENSLAFG00000006691 I 0.000
ZFX Microcebus murinus ENSMICG00000009517 I 0.000
ZFY Myotis lucifugus ENSMLUG00000003962 I 0.000
ZFX Macaca mulatta ENSMMUG00000009801 I 0.000
ZFX Monodelphis domestica ENSMODG00000007512 I 0.000
ENSMPUG00000000105 Mustela putorius furo ENSMPUG00000000105 I 0.000
ENSACAG00000007227 Anolis carolinensis ENSACAG00000007227 I 0.000