Pvit_09540 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_09540 T137232_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFX
M08850_2.00 		Homo sapiens
YBVGGCCTVS
SBAGGCCBVR		 Misc
Kulakovskiy et al.(2013)
ZFX_HUMAN.H11MO.0.A 		0.787 0.953
ZFX
M10098_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZFX_01 		0.787 0.953
Zfx
M08100_2.00 		Mus musculus
BBVRSCBVGGCCTV
BAGGCCBVGSYBVV		 ChIP-seq
Mathelier et al.(2014)
MA0146.2 		0.784 0.950
Zfx
M09017_2.00 		Mus musculus
VVSVSBNBBAGGCCBVGSH
DSCBVGGCCTVVNVSBSBB		 Misc
Kulakovskiy et al.(2013)
ZFX_MOUSE.H11MO.0.B 		0.784 0.950
Zfx
M09517_2.00 		Mus musculus
BNAGGCCT
AGGCCTNV		 Misc
Heinz et al.(2010)
mES-Zfx_GSE11431 		0.784 0.950
Zfx
M00788_2.00 		Mus musculus
NRGGCCNNN
NNNGGCCYN		 PBM
Weirauch et al.(2013)
pTH2933 		0.783 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_09540 C2H2 ZF 414 436
Pvit_09540 C2H2 ZF 446 468
Pvit_09540 C2H2 ZF 478 500
Pvit_09540 C2H2 ZF 509 532
Pvit_09540 C2H2 ZF 538 560
Pvit_09540 C2H2 ZF 566 589
Pvit_09540 C2H2 ZF 595 617
Pvit_09540 C2H2 ZF 623 646
Pvit_09540 C2H2 ZF 652 674
Pvit_09540 C2H2 ZF 680 703
Pvit_09540 C2H2 ZF 709 731
Pvit_09540 C2H2 ZF 737 760
Pvit_09540 C2H2 ZF 766 789

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ogr18022 Ophisaurus gracilis Ogr18022 I 0.807
ENSACAG00000007227 Anolis carolinensis ENSACAG00000007227 I 0.807
ZFX Monodelphis domestica ENSMODG00000007512 I 0.787
ENSOARG00000017137 Ovis aries ENSOARG00000017137 I 0.787
ENSBTAP00000010165-D1 Bos grunniens ENSBTAP00000010165-D1 I 0.787
ENSNLEG00000010044 Nomascus leucogenys ENSNLEG00000010044 I 0.787
ZFX Oryctolagus cuniculus ENSOCUG00000003815 I 0.787
ENSMPUG00000000105 Mustela putorius furo ENSMPUG00000000105 I 0.787
ENSPPYG00000020195 Pongo abelii ENSPPYG00000020195 I 0.787
ENSSHAG00000004983 Sarcophilus harrisii ENSSHAG00000004983 I 0.787
ENSSSCG00000021322 Sus scrofa ENSSSCG00000021322 I 0.787
ZFX Pteropus vampyrus ENSPVAG00000002534 I 0.787
ZFX Tursiops truncatus ENSTTRG00000012488 I 0.787
ENSSTOG00000007158 Ictidomys tridecemlineatus ENSSTOG00000007158 I 0.787
ZFX Pan troglodytes ENSPTRG00000021747 I 0.787
ENSPANG00000000982 Papio anubis ENSPANG00000000982 I 0.787
ZFX Macaca mulatta ENSMMUG00000009801 I 0.787
ENSCPOG00000011739 Cavia porcellus ENSCPOG00000011739 I 0.787
ZFX Dasypus novemcinctus ENSDNOG00000034569 I 0.787
ZFX Callithrix jacchus ENSCJAG00000004841 I 0.787
ZFX Canis familiaris ENSCAFG00000013408 I 0.787
ENSAMEG00000012681 Ailuropoda melanoleuca ENSAMEG00000012681 I 0.787
ZFY Bos taurus ENSBTAG00000007730 I 0.787
ZFY Myotis lucifugus ENSMLUG00000003962 I 0.787
ZFX Equus caballus ENSECAG00000025018 I 0.787
ENSP00000304985 Macaca fascicularis ENSP00000304985 I 0.787
ZFX Microcebus murinus ENSMICG00000009517 I 0.787
ZFX Felis catus ENSFCAG00000010544 I 0.787
ZFX Gorilla gorilla ENSGGOG00000004053 I 0.787
ZFX Homo sapiens ENSG00000005889 D 0.787
Myotis_brandtii_ZFX_10010226 Myotis brandtii Myotis_brandtii_ZFX_10010226 I 0.787
ENSSSCG00000012179 Sus scrofa ENSSSCG00000012179 I 0.786
ENSTSYG00000005088 Tarsius syrichta ENSTSYG00000005088 I 0.784
Zfx Mus musculus ENSMUSG00000079509 D 0.784
ENSCSAG00000018321 Chlorocebus sabaeus ENSCSAG00000018321 I 0.784
Zfx Rattus norvegicus ENSRNOG00000005624 I 0.784
ZFY Pan troglodytes ENSPTRG00000022471 I 0.784
ZFY Homo sapiens ENSG00000067646 I 0.781
ZFX Loxodonta africana ENSLAFG00000006691 I 0.781
ZFX Ornithorhynchus anatinus ENSOANG00000011502 I 0.770