ZNF398 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000004429 T088264_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF398
M07716_2.00 		Homo sapiens
CTSYYTCYYTCCCH
DGGGARRGARRSAG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF398.ChIP-seq.ReprocessedData 		0.820 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000006613 C2H2 ZF 345 366
ENSCAFP00000006613 C2H2 ZF 401 422
ENSCAFP00000006613 C2H2 ZF 429 451
ENSCAFP00000006613 C2H2 ZF 457 479
ENSCAFP00000006613 C2H2 ZF 485 507
ENSCAFP00000006613 C2H2 ZF 513 535
ENSCAFP00000006613 C2H2 ZF 541 563
ENSCAFP00000006613 C2H2 ZF 569 592
ENSCAFP00000040973 C2H2 ZF 120 141
ENSCAFP00000040973 C2H2 ZF 147 164
ENSCAFP00000040973 C2H2 ZF 176 197
ENSCAFP00000040973 C2H2 ZF 204 226
ENSCAFP00000040973 C2H2 ZF 232 254
ENSCAFP00000040973 C2H2 ZF 260 282
ENSCAFP00000040973 C2H2 ZF 288 310
ENSCAFP00000040973 C2H2 ZF 316 338
ENSCAFP00000040973 C2H2 ZF 344 367

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS11G0702400 Oryza sativa OS11G0702400 I
ORGLA11G0188100 Oryza glaberrima ORGLA11G0188100 I
OPUNC11G19830 Oryza punctata OPUNC11G19830 I
ORUFI11G25330 Oryza rufipogon ORUFI11G25330 I
OBART11G23480 Oryza barthii OBART11G23480 I
OB11G27860 Oryza brachyantha OB11G27860 I
GSMUA_Achr6G34890_001 Musa acuminata GSMUA_Achr6G34890_001 I
BGIOSGA033524 Oryza indica BGIOSGA033524 I
Sb01g031920 Sorghum bicolor Sb01g031920 N
OPUNC03G21190 Oryza punctata OPUNC03G21190 N
OS11G0340477 Oryza sativa OS11G0340477 N
Si037516m.g Setaria italica Si037516m.g N
OS03G0437100 Oryza sativa OS03G0437100 N
Traes_2BS_494F02775 Triticum aestivum Traes_2BS_494F02775 N
Traes_2DS_11ADF414D Triticum aestivum Traes_2DS_11ADF414D N
ORUFI03G23230 Oryza rufipogon ORUFI03G23230 N
PDK_20s1446781g002 Phoenix dactylifera PDK_20s1446781g002 N
ORGLA03G0210200 Oryza glaberrima ORGLA03G0210200 N
BGIOSGA010469 Oryza indica BGIOSGA010469 N
OGLUM03G23340 Oryza glumaepatula OGLUM03G23340 N
OBART03G22560 Oryza barthii OBART03G22560 N
OB03G31790 Oryza brachyantha OB03G31790 N
LPERR03G19190 Leersia perrieri LPERR03G19190 N
GSMUA_Achr7G20260_001 Musa acuminata GSMUA_Achr7G20260_001 N
GRMZM5G883760 Zea mays GRMZM5G883760 N
F775_12743 Aegilops tauschii F775_12743 N
BRADI2G49250 Brachypodium distachyon BRADI2G49250 N
BGIOSGA010470 Oryza indica BGIOSGA010470 N