ZNF454 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000031168 T088620_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF454
M04571_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1 		0.825 0.982
ZNF454
M04572_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2 		0.825 0.982
ZNF454
M08346_2.00 		Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM		 ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE 		0.825 0.982
ZNF454
M08256_2.00 		Homo sapiens
GWGCYTT
AARGCWC		 ChIP-seq
Najafabadi et al.(2015b)
ZNF454 		0.825 0.982
ZNF454
M07651_2.00 		Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping 		0.825 0.982
ZNF454
M04573_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1 		0.825 0.982
ZNF454
M04574_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2 		0.825 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000036135 C2H2 ZF 164 186
ENSCAFP00000036135 C2H2 ZF 203 225
ENSCAFP00000036135 C2H2 ZF 231 253
ENSCAFP00000036135 C2H2 ZF 259 281
ENSCAFP00000036135 C2H2 ZF 287 309
ENSCAFP00000036135 C2H2 ZF 315 337
ENSCAFP00000036135 C2H2 ZF 343 365
ENSCAFP00000036135 C2H2 ZF 371 393
ENSCAFP00000036135 C2H2 ZF 399 421
ENSCAFP00000036135 C2H2 ZF 427 449
ENSCAFP00000036135 C2H2 ZF 455 477
ENSCAFP00000036135 C2H2 ZF 483 505

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA09G15650 Oryza nivara ONIVA09G15650 N 0.000
Pavir.J30425 Panicum virgatum Pavir.J30425 N 0.000
Pavir.Ba01676 Panicum virgatum Pavir.Ba01676 N 0.000
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.000
TRIUR3_24492 Triticum urartu TRIUR3_24492 N 0.000
Traes_5DL_F17F78F73 Triticum aestivum Traes_5DL_F17F78F73 N 0.000
Traes_5BL_445FD57BE Triticum aestivum Traes_5BL_445FD57BE N 0.000
Traes_5AL_D03C2901D Triticum aestivum Traes_5AL_D03C2901D N 0.000
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.000
Si030613m.g Setaria italica Si030613m.g N 0.000
Sb02g028780 Sorghum bicolor Sb02g028780 N 0.000
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.000
OS09G0494300 Oryza sativa OS09G0494300 N 0.000
ORUFI09G16230 Oryza rufipogon ORUFI09G16230 N 0.000
ORGLA09G0115900 Oryza glaberrima ORGLA09G0115900 N 0.000
OPUNC09G13490 Oryza punctata OPUNC09G13490 N 0.000
BGIOSGA029516 Oryza indica BGIOSGA029516 N 0.000
OMERI07G04230 Oryza meridionalis OMERI07G04230 N 0.000
OLONG_025649 Oryza longistaminata OLONG_025649 N 0.000
OGLUM09G15680 Oryza glumaepatula OGLUM09G15680 N 0.000
OBART09G15030 Oryza barthii OBART09G15030 N 0.000
OB09G21610 Oryza brachyantha OB09G21610 N 0.000
LPERR09G11190 Leersia perrieri LPERR09G11190 N 0.000
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.000
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.000
GRMZM2G168269 Zea mays GRMZM2G168269 N 0.000
GRMZM2G025095 Zea mays GRMZM2G025095 N 0.000
F775_07408 Aegilops tauschii F775_07408 N 0.000
BRADI4G34050 Brachypodium distachyon BRADI4G34050 N 0.000
Bra038936 Brassica rapa Bra038936 N 0.000
Bo8g030620 Brassica oleracea Bo8g030620 N 0.000