PGSC0003DMG400013699 (Solanum tuberosum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 PGSC0003DMG400013699 T260857_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400035615 MBD 188 260
PGSC0003DMT400035616 MBD 188 260
PGSC0003DMT400035617 MBD 188 260

Links

Other MBD family TFs
Other Solanum tuberosum TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 1.000
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.831
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N 0.826
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.819
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.819
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.819
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.817
mgf002635m Mimulus guttatus mgf002635m N 0.806
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.803
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.803
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.792
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.792
TCM_039691 Theobroma cacao TCM_039691 N 0.792
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.778
Pm008965 Prunus mume Pm008965 N 0.778
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.778
29843.m000288 Ricinus communis 29843.m000288 N 0.775
GSMUA_Achr1G23690_001 Musa acuminata GSMUA_Achr1G23690_001 N 0.772
GLYMA01G00520 Glycine max GLYMA01G00520 N 0.764
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.764
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.764
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.753
GLYMA07G15620 Glycine max GLYMA07G15620 N 0.750
Ca_15552 Cicer arietinum Ca_15552 N 0.750
Cla005887 Citrullus lanatus Cla005887 N 0.750
Lus10021593.g Linum usitatissimum Lus10021593.g N 0.750
OB09G21610 Oryza brachyantha OB09G21610 N 0.746
gene12231-v1.0-hybrid Fragaria vesca gene12231-v1.0-hybrid N 0.743
LPERR09G11190 Leersia perrieri LPERR09G11190 N 0.736
Ca_15553 Cicer arietinum Ca_15553 N 0.736
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.733
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.724
BGIOSGA029516 Oryza indica BGIOSGA029516 N 0.722
GRMZM2G025095 Zea mays GRMZM2G025095 N 0.722
GRMZM2G168269 Zea mays GRMZM2G168269 N 0.722
MLOC_66533 Hordeum vulgare MLOC_66533 N 0.722
OGLUM09G15680 Oryza glumaepatula OGLUM09G15680 N 0.722
OLONG_025649 Oryza longistaminata OLONG_025649 N 0.722
OMERI07G04230 Oryza meridionalis OMERI07G04230 N 0.722
ONIVA09G15650 Oryza nivara ONIVA09G15650 N 0.722
OPUNC09G13490 Oryza punctata OPUNC09G13490 N 0.722
ORUFI09G16230 Oryza rufipogon ORUFI09G16230 N 0.722
OS09G0494300 Oryza sativa OS09G0494300 N 0.722
Si030613m.g Setaria italica Si030613m.g N 0.722
Traes_5BL_445FD57BE Triticum aestivum Traes_5BL_445FD57BE N 0.722
Traes_5DL_F17F78F73 Triticum aestivum Traes_5DL_F17F78F73 N 0.722
MDP0000222923 Malus domestica MDP0000222923 N 0.722
Pavir.J30425 Panicum virgatum Pavir.J30425 N 0.722
MBD2 Arabidopsis thaliana AT5G35330 N 0.720
Bo8g030620 Brassica oleracea Bo8g030620 N 0.718
Bra038936 Brassica rapa Bra038936 N 0.718
PDK_20s1621301g001 Phoenix dactylifera PDK_20s1621301g001 N 0.717
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.708
Sb02g028780 Sorghum bicolor Sb02g028780 N 0.708
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.708
Pavir.Ba01676 Panicum virgatum Pavir.Ba01676 N 0.708