TCM_039691 (Theobroma cacao)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 TCM_039691 T261132_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY32141 MBD 173 248
EOY32142 MBD 183 258
EOY32143 MBD 183 258

Links

Other MBD family TFs
Other Theobroma cacao TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.931
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.931
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.917
Ca_15552 Cicer arietinum Ca_15552 N 0.903
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.889
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.889
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.861
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.861
Cla005887 Citrullus lanatus Cla005887 N 0.861
Ca_15553 Cicer arietinum Ca_15553 N 0.861
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.859
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.847
mgf002635m Mimulus guttatus mgf002635m N 0.847
GLYMA01G00520 Glycine max GLYMA01G00520 N 0.833
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.833
GLYMA07G15620 Glycine max GLYMA07G15620 N 0.819
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.819
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.819
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.806
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.792
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.792
chr2.CM0373.530.nc Lotus japonicus chr2.CM0373.530.nc N 0.792
29843.m000288 Ricinus communis 29843.m000288 N 0.792
Pm008965 Prunus mume Pm008965 N 0.792
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.792
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.778
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.764
MBD2 Arabidopsis thaliana AT5G35330 N 0.764
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.753
Bo8g030620 Brassica oleracea Bo8g030620 N 0.750
Bra038936 Brassica rapa Bra038936 N 0.750
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N 0.750
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.747
Lus10021593.g Linum usitatissimum Lus10021593.g N 0.736
MDP0000222923 Malus domestica MDP0000222923 N 0.722
gene12231-v1.0-hybrid Fragaria vesca gene12231-v1.0-hybrid N 0.722
MTR_3g037440 Medicago truncatula MTR_3g037440 N 0.708