orange1.1g019505m.g (Citrus sinensis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 orange1.1g019505m.g T261580_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g019469m MBD 178 250
orange1.1g019480m MBD 178 250
orange1.1g019489m MBD 178 250
orange1.1g019501m MBD 178 250
orange1.1g019505m MBD 178 250

Links

Other MBD family TFs
Other Citrus sinensis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.986
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.873
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.861
Pm008965 Prunus mume Pm008965 N 0.861
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N 0.848
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.847
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.847
TCM_039691 Theobroma cacao TCM_039691 N 0.833
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.833
Cla005887 Citrullus lanatus Cla005887 N 0.833
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.833
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.833
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.819
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.819
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.806
29843.m000288 Ricinus communis 29843.m000288 N 0.803
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.803
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.803
MDP0000222923 Malus domestica MDP0000222923 N 0.792
mgf002635m Mimulus guttatus mgf002635m N 0.792
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.792
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.792
Ca_15552 Cicer arietinum Ca_15552 N 0.778
Lus10021593.g Linum usitatissimum Lus10021593.g N 0.778
gene12231-v1.0-hybrid Fragaria vesca gene12231-v1.0-hybrid N 0.771
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.767
GLYMA07G15620 Glycine max GLYMA07G15620 N 0.764
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.764
GLYMA01G00520 Glycine max GLYMA01G00520 N 0.750
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.750
Ca_15553 Cicer arietinum Ca_15553 N 0.750
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.747
Cucsa.209330 Cucumis sativus Cucsa.209330 N 0.746
chr2.CM0373.530.nc Lotus japonicus chr2.CM0373.530.nc N 0.736
MBD2 Arabidopsis thaliana AT5G35330 N 0.733
BRADI1G34320 Brachypodium distachyon BRADI1G34320 N 0.708
GSMUA_Achr1G23690_001 Musa acuminata GSMUA_Achr1G23690_001 N 0.702