PATZ1 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000010978 T089424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000020272 C2H2 ZF 292 314
ENSCJAP00000020272 C2H2 ZF 356 377
ENSCJAP00000020272 C2H2 ZF 383 405
ENSCJAP00000020272 C2H2 ZF 413 436
ENSCJAP00000020287 C2H2 ZF 267 289
ENSCJAP00000020287 C2H2 ZF 331 352
ENSCJAP00000020287 C2H2 ZF 358 380
ENSCJAP00000020287 C2H2 ZF 388 411
ENSCJAP00000020290 C2H2 ZF 291 313
ENSCJAP00000020290 C2H2 ZF 355 376
ENSCJAP00000020290 C2H2 ZF 382 404
ENSCJAP00000020290 C2H2 ZF 412 435
ENSCJAP00000020301 C2H2 ZF 292 314
ENSCJAP00000020301 C2H2 ZF 356 377
ENSCJAP00000020301 C2H2 ZF 383 405
ENSCJAP00000020301 C2H2 ZF 413 436

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GATA26 Arabidopsis thaliana AT4G17570 D
GATA27 Arabidopsis thaliana AT5G47140 D
Eucgr.D02129 Eucalyptus grandis Eucgr.D02129 I
cassava42719.valid.m1 Manihot esculenta cassava42719.valid.m1 I
Ciclev10019614m.g Citrus clementina Ciclev10019614m.g I
Carubv10026597m.g Capsella rubella Carubv10026597m.g I
Carubv10007115m.g Capsella rubella Carubv10007115m.g I
Cagra.3675s0017 Capsella grandiflora Cagra.3675s0017 I
Cagra.3356s0048 Capsella grandiflora Cagra.3356s0048 I
Bostr.30275s0218 Boechera stricta Bostr.30275s0218 I
Bostr.28243s0001 Boechera stricta Bostr.28243s0001 I
Aquca_082_00024 Aquilegia coerulea Aquca_082_00024 I
Aquca_053_00062 Aquilegia coerulea Aquca_053_00062 I
mgf024972m Mimulus guttatus mgf024972m I
mgf016271m Mimulus guttatus mgf016271m I
mgf015364m Mimulus guttatus mgf015364m I
estExt_fgenesh1_pg.C_4100005 Physcomitrella patens estExt_fgenesh1_pg.C_4100005 I
estExt_fgenesh1_pg.C_1220019 Physcomitrella patens estExt_fgenesh1_pg.C_1220019 I
LjSGA_060304.1 Lotus japonicus LjSGA_060304.1 I
Eucgr.E00364 Eucalyptus grandis Eucgr.E00364 I
evm.TU.supercontig_74.95 Carica papaya evm.TU.supercontig_74.95 I
Gorai.003G177500 Gossypium raimondii Gorai.003G177500 I
Gorai.004G193200 Gossypium raimondii Gorai.004G193200 I
Gorai.006G214400 Gossypium raimondii Gorai.006G214400 I
Gorai.008G231500 Gossypium raimondii Gorai.008G231500 I
Lus10011008.g Linum usitatissimum Lus10011008.g I
Lus10011010.g Linum usitatissimum Lus10011010.g I
MDP0000129092 Malus domestica MDP0000129092 I
orange1.1g009155m.g Citrus sinensis orange1.1g009155m.g I
SapurV1A.0107s0250 Salix purpurea SapurV1A.0107s0250 I
SapurV1A.0201s0160 Salix purpurea SapurV1A.0201s0160 I
Thhalv10000871m.g Eutrema salsugineum Thhalv10000871m.g I
Thhalv10024940m.g Eutrema salsugineum Thhalv10024940m.g I
PK11095.1 Cannabis sativa PK11095.1 I
AMTR_s00008p00092930 Amborella trichopoda AMTR_s00008p00092930 I
Bra021041 Brassica rapa Bra021041 I
GLYMA01G41370 Glycine max GLYMA01G41370 I
GATA26 Arabidopsis lyrata fgenesh2_kg.7__2553__AT4G17570.1 I
GATA27 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8000066 I
F775_19309 Aegilops tauschii F775_19309 I
BRADI5G17370 Brachypodium distachyon BRADI5G17370 I
Bra040167 Brassica rapa Bra040167 I
Bra024961 Brassica rapa Bra024961 I
Bra022107 Brassica rapa Bra022107 I
GLYMA05G05320 Glycine max GLYMA05G05320 I
Bra017501 Brassica rapa Bra017501 I
Bra017500 Brassica rapa Bra017500 I
Bo9g069320 Brassica oleracea Bo9g069320 I
Bo8g049560 Brassica oleracea Bo8g049560 I
Bo7g077300 Brassica oleracea Bo7g077300 I
Bo2g132210 Brassica oleracea Bo2g132210 I
Bo1g017650 Brassica oleracea Bo1g017650 I
27940.m000323 Ricinus communis 27940.m000323 I
GLYMA11G04060 Glycine max GLYMA11G04060 I
GLYMA17G15610 Glycine max GLYMA17G15610 I
GSMUA_Achr11G17690_001 Musa acuminata GSMUA_Achr11G17690_001 I
GSMUA_Achr11G23110_001 Musa acuminata GSMUA_Achr11G23110_001 I
GSMUA_Achr2G18310_001 Musa acuminata GSMUA_Achr2G18310_001 I
GSMUA_Achr5G18290_001 Musa acuminata GSMUA_Achr5G18290_001 I
GSMUA_Achr8G15000_001 Musa acuminata GSMUA_Achr8G15000_001 I
MLOC_15510 Hordeum vulgare MLOC_15510 I
POPTR_0001s15170 Populus trichocarpa POPTR_0001s15170 I
POPTR_0003s08080 Populus trichocarpa POPTR_0003s08080 I
TCM_015870 Theobroma cacao TCM_015870 I
Traes_2AL_01E6C08C0 Triticum aestivum Traes_2AL_01E6C08C0 I
Traes_2BL_4575D095D Triticum aestivum Traes_2BL_4575D095D I
Traes_2DL_C46B73FA3 Triticum aestivum Traes_2DL_C46B73FA3 I
Ca_02313 Cicer arietinum Ca_02313 I