CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HIC2
(
Cavia porcellus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCPOG00000001134
T089779_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN
NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.827
1.000
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN
NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.795
0.852
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.795
0.852
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN
NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.795
0.852
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH
DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.795
0.852
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000001024
C2H2 ZF
445
467
YVCIPCAKGFPSSEQLNAHVETH
ENSCPOP00000001024
C2H2 ZF
508
530
FKCSVCEKTYKDPATLRQHEKTH
ENSCPOP00000001024
C2H2 ZF
536
558
FPCNICGKMFTQRGTMTRHMRSH
ENSCPOP00000001024
C2H2 ZF
564
586
FACDECGMRFTRQYRLTEHMRVH
ENSCPOP00000001024
C2H2 ZF
592
614
YECQLCGGKFTQQRNLISHLRMH
Links
Other
C2H2 ZF
family TFs
Other
Cavia porcellus
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy