hic2 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-960044 T145653_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN

NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.824 0.957
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN

NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.791 0.843
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC

GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.791 0.843
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN

NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.791 0.843
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH

DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.791 0.843
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002931932 C2H2 ZF 376 398
XP_002931932 C2H2 ZF 433 455
XP_002931932 C2H2 ZF 461 483
XP_002931932 C2H2 ZF 489 511
XP_002931932 C2H2 ZF 517 539

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAPLG00000002158 Anas platyrhynchos ENSAPLG00000002158 I 0.826
ENSFALG00000014495 Ficedula albicollis ENSFALG00000014495 I 0.826
ENSGALG00000001403 Gallus gallus ENSGALG00000001403 I 0.826
ENSLOCG00000002169 Lepisosteus oculatus ENSLOCG00000002169 I 0.826
HIC2 Meleagris gallopavo ENSMGAG00000000949 I 0.826
HIC2 Taeniopygia guttata ENSTGUG00000008699 I 0.826
Aan_R008211 Calypte anna Aan_R008211 I 0.826
Afo_R001109 Aptenodytes forsteri Afo_R001109 I 0.826
Alligator_sinensis_CCG015471.1 Alligator sinensis Alligator_sinensis_CCG015471.1 I 0.826
Brh_R005582 Buceros rhinoceros Brh_R005582 I 0.826
Cmyd_10017824 Chelonia mydas Cmyd_10017824 I 0.826
Gfo_R010813 Geospiza fortis Gfo_R010813 I 0.826
Tal_R003180 Tyto alba Tal_R003180 I 0.826
HIC2 Canis familiaris ENSCAFG00000032493 I 0.824
HIC2 Cavia porcellus ENSCPOG00000001134 I 0.824
ENSCSAG00000013356 Chlorocebus sabaeus ENSCSAG00000013356 I 0.824
HIC2 Dasypus novemcinctus ENSDNOG00000003162 I 0.824
HIC2 Equus caballus ENSECAG00000017997 I 0.824
HIC2 Felis catus ENSFCAG00000023903 I 0.824
HIC2 Homo sapiens ENSG00000169635 D 0.824
HIC2 Gorilla gorilla ENSGGOG00000006041 I 0.824
HIC2 Myotis lucifugus ENSMLUG00000009669 I 0.824
ENSMPUG00000003198 Mustela putorius furo ENSMPUG00000003198 I 0.824
Hic2 Mus musculus ENSMUSG00000050240 I 0.824
HIC2 Oryctolagus cuniculus ENSOCUG00000010516 I 0.824
HIC2 Otolemur garnettii ENSOGAG00000030274 I 0.824
ENSPANG00000024301 Papio anubis ENSPANG00000024301 I 0.824
HIC2 Procavia capensis ENSPCAG00000015907 I 0.824
ENSPPYG00000012022 Pongo abelii ENSPPYG00000012022 I 0.824
ENSPSIG00000000839 Pelodiscus sinensis ENSPSIG00000000839 I 0.824
ENSPSIG00000000992 Pelodiscus sinensis ENSPSIG00000000992 I 0.824
HIC2 Pan troglodytes ENSPTRG00000014112 I 0.824
HIC2 Pteropus vampyrus ENSPVAG00000000111 I 0.824
Hic2 Rattus norvegicus ENSRNOG00000051458 I 0.824
ENSSSCG00000021196 Sus scrofa ENSSSCG00000021196 I 0.824
ENSSTOG00000006360 Ictidomys tridecemlineatus ENSSTOG00000006360 I 0.824
ENSP00000384889 Macaca fascicularis ENSP00000384889 I 0.824
Myotis_brandtii_HIC2_10021802 Myotis brandtii Myotis_brandtii_HIC2_10021802 I 0.824
HIC2 Microcebus murinus ENSMICG00000005154 I 0.822
Ogr08090 Ophisaurus gracilis Ogr08090 I 0.822
Pvit_18806 Pogona vitticeps Pvit_18806 I 0.822
hic1l Gasterosteus aculeatus ENSGACG00000004268 I 0.820
ENSONIG00000014335 Oreochromis niloticus ENSONIG00000014335 I 0.820
ENSPFOG00000020465 Poecilia formosa ENSPFOG00000020465 I 0.820
hic1l Takifugu rubripes ENSTRUG00000013139 I 0.820
ENSXMAG00000020311 Xiphophorus maculatus ENSXMAG00000020311 I 0.820
HIC2 Bos taurus ENSBTAG00000005951 I 0.808
hic1 Gasterosteus aculeatus ENSGACG00000010848 I 0.797
hic1 Oryzias latipes ENSORLG00000004895 I 0.797
hic1 Takifugu rubripes ENSTRUG00000004590 I 0.797
XP_002937184 Xenopus tropicalis XP_002937184 I 0.796
ENSFALG00000006543 Ficedula albicollis ENSFALG00000006543 I 0.794
ENSGALG00000026718 Gallus gallus ENSGALG00000026718 I 0.794
ENSLACG00000007028 Latimeria chalumnae ENSLACG00000007028 I 0.794
ENSMGAG00000005397 Meleagris gallopavo ENSMGAG00000005397 I 0.794
ENSPSIG00000007902 Pelodiscus sinensis ENSPSIG00000007902 I 0.794
HIC1 Taeniopygia guttata ENSTGUG00000005835 I 0.794
Aan_R003503 Calypte anna Aan_R003503 I 0.794
Afo_R013473 Aptenodytes forsteri Afo_R013473 I 0.794
HIC1 Cavia porcellus ENSCPOG00000020382 I 0.791
Hic1 Mus musculus ENSMUSG00000043099 D 0.791
Alligator_sinensis_CCG008952.1 Alligator sinensis Alligator_sinensis_CCG008952.1 I 0.791
hic2 Danio rerio ENSDARG00000100497 I 0.772
ENSAMXG00000024918 Astyanax mexicanus ENSAMXG00000024918 I 0.770