CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAVG00000002454
(
Ciona savignyi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCSAVG00000002454
T090725_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAVP00000004166
C2H2 ZF
129
156
HTCYWEDCSRKRKCFKAKYKLVNHIRVH
ENSCSAVP00000004166
C2H2 ZF
162
186
FLCPYPDCGKMFGRSENLKIHQRTH
ENSCSAVP00000004166
C2H2 ZF
192
216
FPCKFPGCERRFANSSDRKKHSYMH
ENSCSAVP00000004166
C2H2 ZF
222
246
YTCKYEGCDRSYTHPSSLRKHIRMH
Links
Other
C2H2 ZF
family TFs
Other
Ciona savignyi
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA02G40130
Oryza nivara
ONIVA02G40130
I
Pavir.J14051
Panicum virgatum
Pavir.J14051
I
Pavir.Gb01315
Panicum virgatum
Pavir.Gb01315
I
Si009551m.g
Setaria italica
Si009551m.g
I
ORUFI02G38880
Oryza rufipogon
ORUFI02G38880
I
ORGLA02G0325900
Oryza glaberrima
ORGLA02G0325900
I
OPUNC02G34540
Oryza punctata
OPUNC02G34540
I
BGIOSGA005358
Oryza indica
BGIOSGA005358
I
OMERI01G33350
Oryza meridionalis
OMERI01G33350
I
OLONG_013725
Oryza longistaminata
OLONG_013725
I
OGLUM02G38510
Oryza glumaepatula
OGLUM02G38510
I
OBART02G37370
Oryza barthii
OBART02G37370
I
MLOC_53202
Hordeum vulgare
MLOC_53202
N
Traes_6AL_E94233A40
Triticum aestivum
Traes_6AL_E94233A40
N
Traes_6DL_5D47DC487
Triticum aestivum
Traes_6DL_5D47DC487
N
F775_13778
Aegilops tauschii
F775_13778
N
BRADI3G55430
Brachypodium distachyon
BRADI3G55430
N