OBART02G37370 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART02G37370 T275478_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.792 0.894
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.792 0.872
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.792 0.872
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.792 0.872
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.774 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G37370.1 Myb 759 787
OBART02G37370.2 Myb 671 721
OBART02G37370.3 Myb 754 804
OBART02G37370.4 Myb 671 699
OBART02G37370.5 Myb 635 685

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA005358 Oryza indica BGIOSGA005358 I 0.909
OGLUM02G38510 Oryza glumaepatula OGLUM02G38510 I 0.909
OLONG_013725 Oryza longistaminata OLONG_013725 I 0.909
OMERI01G33350 Oryza meridionalis OMERI01G33350 I 0.909
ONIVA02G40130 Oryza nivara ONIVA02G40130 I 0.909
OPUNC02G34540 Oryza punctata OPUNC02G34540 I 0.909
ORGLA02G0325900 Oryza glaberrima ORGLA02G0325900 I 0.909
ORUFI02G38880 Oryza rufipogon ORUFI02G38880 I 0.909
LPERR02G30830 Leersia perrieri LPERR02G30830 I 0.860
OB02G44060 Oryza brachyantha OB02G44060 I 0.860
TRFL1 Arabidopsis lyrata fgenesh2_kg.5__1021__AT3G46590.3 I 0.852
PGSC0003DMG400023432 Solanum tuberosum PGSC0003DMG400023432 I 0.852
Solyc05g054410.2 Solanum lycopersicum Solyc05g054410.2 I 0.852
Cla004068 Citrullus lanatus Cla004068 I 0.800
Cucsa.165230 Cucumis sativus Cucsa.165230 I 0.800
TRFL2 Arabidopsis lyrata Al_scaffold_0001_698 I 0.792
TRP5 Arabidopsis thaliana AT1G07540 D 0.792
TRP3 Arabidopsis thaliana AT3G12560 I 0.792
TRP2 Arabidopsis thaliana AT3G46590 D 0.792
BGIOSGA012326 Oryza indica BGIOSGA012326 I 0.792
Bo01118s020 Brassica oleracea Bo01118s020 I 0.792
Bo1g139150 Brassica oleracea Bo1g139150 I 0.792
Bo5g008270 Brassica oleracea Bo5g008270 I 0.792
Bo5g133380 Brassica oleracea Bo5g133380 I 0.792
Bra015585 Brassica rapa Bra015585 I 0.792
Bra030689 Brassica rapa Bra030689 I 0.792
Bra034751 Brassica rapa Bra034751 I 0.792
Bra038729 Brassica rapa Bra038729 I 0.792
BRADI1G66677 Brachypodium distachyon BRADI1G66677 I 0.792
F775_17181 Aegilops tauschii F775_17181 I 0.792
TRFL9 Arabidopsis lyrata fgenesh2_kg.3__1313__AT3G12560.1 I 0.792
GLYMA07G15940 Glycine max GLYMA07G15940 I 0.792
GLYMA11G34050 Glycine max GLYMA11G34050 I 0.792
GLYMA13G41210 Glycine max GLYMA13G41210 I 0.792
GLYMA18G04251 Glycine max GLYMA18G04251 I 0.792
GLYMA18G39911 Glycine max GLYMA18G39911 I 0.792
GRMZM2G063151 Zea mays GRMZM2G063151 I 0.792
GRMZM2G110309 Zea mays GRMZM2G110309 I 0.792
GSMUA_Achr7G15090_001 Musa acuminata GSMUA_Achr7G15090_001 I 0.792
GSMUA_Achr9G03910_001 Musa acuminata GSMUA_Achr9G03910_001 I 0.792
LPERR03G10840 Leersia perrieri LPERR03G10840 I 0.792
MLOC_59817 Hordeum vulgare MLOC_59817 I 0.792
MTR_3g067935 Medicago truncatula MTR_3g067935 I 0.792
MTR_7g061840 Medicago truncatula MTR_7g061840 I 0.792
OB03G22340 Oryza brachyantha OB03G22340 I 0.792
OBART03G12240 Oryza barthii OBART03G12240 I 0.792
OGLUM03G12230 Oryza glumaepatula OGLUM03G12230 I 0.792
OLONG_025333 Oryza longistaminata OLONG_025333 I 0.792
OMERI03G11490 Oryza meridionalis OMERI03G11490 I 0.792
ONIVA11G13450 Oryza nivara ONIVA11G13450 I 0.792
OPUNC03G11810 Oryza punctata OPUNC03G11810 I 0.792
ORGLA03G0118300 Oryza glaberrima ORGLA03G0118300 I 0.792
ORUFI03G12870 Oryza rufipogon ORUFI03G12870 I 0.792
OS03G0274300 Oryza sativa OS03G0274300 I 0.792
PGSC0003DMG400002138 Solanum tuberosum PGSC0003DMG400002138 I 0.792
PGSC0003DMG400030324 Solanum tuberosum PGSC0003DMG400030324 I 0.792
POPTR_0001s24840 Populus trichocarpa POPTR_0001s24840 I 0.792
POPTR_0009s03730 Populus trichocarpa POPTR_0009s03730 I 0.792
PRUPE_ppa002374mg Prunus persica PRUPE_ppa002374mg I 0.792
PRUPE_ppa002403mg Prunus persica PRUPE_ppa002403mg I 0.792
PRUPE_ppa002522mg Prunus persica PRUPE_ppa002522mg I 0.792
Sb01g039650 Sorghum bicolor Sb01g039650 I 0.792
Si016548m.g Setaria italica Si016548m.g I 0.792
Si034524m.g Setaria italica Si034524m.g I 0.792
Solyc06g005590.2 Solanum lycopersicum Solyc06g005590.2 I 0.792
Solyc06g076270.2 Solanum lycopersicum Solyc06g076270.2 I 0.792
TCM_041816 Theobroma cacao TCM_041816 I 0.792
TCM_042704 Theobroma cacao TCM_042704 I 0.792
Traes_4AS_FA7E65184 Triticum aestivum Traes_4AS_FA7E65184 I 0.792
Traes_4BL_AB2636FB0 Triticum aestivum Traes_4BL_AB2636FB0 I 0.792
Traes_4DL_3849A9A5F Triticum aestivum Traes_4DL_3849A9A5F I 0.792
TRIUR3_18647 Triticum urartu TRIUR3_18647 I 0.792
VIT_06s0004g04940 Vitis vinifera VIT_06s0004g04940 I 0.792
VIT_13s0019g01670 Vitis vinifera VIT_13s0019g01670 I 0.792
Ca_02624 Cicer arietinum Ca_02624 I 0.792
Ca_13309 Cicer arietinum Ca_13309 I 0.792
Ca_21136 Cicer arietinum Ca_21136 I 0.792
Cla008361 Citrullus lanatus Cla008361 I 0.792
Pm000720 Prunus mume Pm000720 I 0.792
Pm002686 Prunus mume Pm002686 I 0.792
28880.m000016 Ricinus communis 28880.m000016 I 0.792
cassava19451.valid.m1 Manihot esculenta cassava19451.valid.m1 I 0.792
cassava19452.valid.m1 Manihot esculenta cassava19452.valid.m1 I 0.792
cassava19453.valid.m1 Manihot esculenta cassava19453.valid.m1 I 0.792
cassava30955.valid.m1 Manihot esculenta cassava30955.valid.m1 I 0.792
Cucsa.117790 Cucumis sativus Cucsa.117790 I 0.792
e_gw1.132.51.1 Physcomitrella patens e_gw1.132.51.1 I 0.792
mgf005791m Mimulus guttatus mgf005791m I 0.792
mgf007893m Mimulus guttatus mgf007893m I 0.792
Aquca_009_00956 Aquilegia coerulea Aquca_009_00956 I 0.792
Bostr.25219s0206 Boechera stricta Bostr.25219s0206 I 0.792
Bostr.26833s0301 Boechera stricta Bostr.26833s0301 I 0.792
Bostr.3640s0028 Boechera stricta Bostr.3640s0028 I 0.792
Cagra.0448s0008 Capsella grandiflora Cagra.0448s0008 I 0.792
Cagra.1317s0071 Capsella grandiflora Cagra.1317s0071 I 0.792
Cagra.1671s0374 Capsella grandiflora Cagra.1671s0374 I 0.792
Cagra.5641s0019 Capsella grandiflora Cagra.5641s0019 I 0.792
Carubv10011259m.g Capsella rubella Carubv10011259m.g I 0.792
Carubv10013179m.g Capsella rubella Carubv10013179m.g I 0.792
Carubv10016934m.g Capsella rubella Carubv10016934m.g I 0.792
Carubv10026172m.g Capsella rubella Carubv10026172m.g I 0.792
Ciclev10027927m.g Citrus clementina Ciclev10027927m.g I 0.792
Eucgr.B02351 Eucalyptus grandis Eucgr.B02351 I 0.792
Eucgr.J01245 Eucalyptus grandis Eucgr.J01245 I 0.792
evm.TU.supercontig_1.421 Carica papaya evm.TU.supercontig_1.421 I 0.792
evm.TU.supercontig_81.127 Carica papaya evm.TU.supercontig_81.127 I 0.792
gene02230-v1.0-hybrid Fragaria vesca gene02230-v1.0-hybrid I 0.792
Gorai.003G130700 Gossypium raimondii Gorai.003G130700 I 0.792
Gorai.011G266100 Gossypium raimondii Gorai.011G266100 I 0.792
Gorai.013G021300 Gossypium raimondii Gorai.013G021300 I 0.792
Lus10010844.g Linum usitatissimum Lus10010844.g I 0.792
Lus10024385.g Linum usitatissimum Lus10024385.g I 0.792
MDP0000137531 Malus domestica MDP0000137531 I 0.792
MDP0000209974 Malus domestica MDP0000209974 I 0.792
orange1.1g042386m.g Citrus sinensis orange1.1g042386m.g I 0.792
Pavir.Ia03771 Panicum virgatum Pavir.Ia03771 I 0.792
Pavir.J18132 Panicum virgatum Pavir.J18132 I 0.792
SapurV1A.0041s0150 Salix purpurea SapurV1A.0041s0150 I 0.792
Thhalv10002472m.g Eutrema salsugineum Thhalv10002472m.g I 0.792
Thhalv10007062m.g Eutrema salsugineum Thhalv10007062m.g I 0.792
Thhalv10013086m.g Eutrema salsugineum Thhalv10013086m.g I 0.792
Thhalv10020283m.g Eutrema salsugineum Thhalv10020283m.g I 0.792
PK21687.1 Cannabis sativa PK21687.1 D 0.792
TRP4 Arabidopsis thaliana AT5G13820 I 0.782
Bo2g011570 Brassica oleracea Bo2g011570 I 0.782
Bo3g009370 Brassica oleracea Bo3g009370 I 0.782
Bo9g166400 Brassica oleracea Bo9g166400 I 0.782
Bra006218 Brassica rapa Bra006218 I 0.782
Bra008800 Brassica rapa Bra008800 I 0.782
Bra023437 Brassica rapa Bra023437 I 0.782
TBP1 Arabidopsis lyrata fgenesh2_kg.6__1339__AT5G13820.1 I 0.782
MTR_5g080010 Medicago truncatula MTR_5g080010 I 0.782
POPTR_0008s05740 Populus trichocarpa POPTR_0008s05740 I 0.782
Ca_16107 Cicer arietinum Ca_16107 I 0.782
cassava31336.valid.m1 Manihot esculenta cassava31336.valid.m1 I 0.782
Bostr.2902s0116 Boechera stricta Bostr.2902s0116 I 0.782
Ciclev10030878m.g Citrus clementina Ciclev10030878m.g I 0.782
Lus10000947.g Linum usitatissimum Lus10000947.g I 0.782
Lus10002704.g Linum usitatissimum Lus10002704.g I 0.782
Lus10040285.g Linum usitatissimum Lus10040285.g I 0.782
MDP0000119184 Malus domestica MDP0000119184 I 0.782
SapurV1A.0451s0070 Salix purpurea SapurV1A.0451s0070 I 0.782
Thhalv10012893m.g Eutrema salsugineum Thhalv10012893m.g I 0.782
LjSGA_019393.1 Lotus japonicus LjSGA_019393.1 I 0.782
TRFL4 Arabidopsis lyrata Al_scaffold_0005_2280 I 0.774
AMTR_s00009p00107000 Amborella trichopoda AMTR_s00009p00107000 I 0.774
AMTR_s00012p00239180 Amborella trichopoda AMTR_s00012p00239180 I 0.774
TRFL4 Arabidopsis thaliana AT3G53790 I 0.774
TRP1 Arabidopsis thaliana AT5G59430 D 0.774
Bo9g139390 Brassica oleracea Bo9g139390 I 0.774
Bra002566 Brassica rapa Bra002566 I 0.774
ATTRP1 Arabidopsis lyrata fgenesh2_kg.8__1886__AT5G59430.4 I 0.774
GLYMA11G14760 Glycine max GLYMA11G14760 I 0.774
GLYMA12G06680 Glycine max GLYMA12G06680 I 0.774
GLYMA15G04200 Glycine max GLYMA15G04200 I 0.774
GRMZM2G133016 Zea mays GRMZM2G133016 I 0.774
GSMUA_Achr10G22620_001 Musa acuminata GSMUA_Achr10G22620_001 I 0.774
GSMUA_Achr8G20810_001 Musa acuminata GSMUA_Achr8G20810_001 I 0.774
MTR_2g097290 Medicago truncatula MTR_2g097290 I 0.774
POPTR_0006s08680 Populus trichocarpa POPTR_0006s08680 I 0.774
Sb06g019970 Sorghum bicolor Sb06g019970 I 0.774
SELMODRAFT_121021 Selaginella moellendorffii SELMODRAFT_121021 I 0.774
SELMODRAFT_123062 Selaginella moellendorffii SELMODRAFT_123062 I 0.774
Si000591m.g Setaria italica Si000591m.g I 0.774
TCM_021921 Theobroma cacao TCM_021921 I 0.774
TRFL4 Vitis vinifera VIT_08s0007g00500 I 0.774
Pm018821 Prunus mume Pm018821 I 0.774
gw1.98.100.1 Physcomitrella patens gw1.98.100.1 I 0.774
Aquca_003_00096 Aquilegia coerulea Aquca_003_00096 I 0.774
Bostr.18473s0300 Boechera stricta Bostr.18473s0300 I 0.774
gene18432-v1.0-hybrid Fragaria vesca gene18432-v1.0-hybrid I 0.774
gene26492-v1.0-hybrid Fragaria vesca gene26492-v1.0-hybrid I 0.774
Gorai.006G172000 Gossypium raimondii Gorai.006G172000 I 0.774
Pavir.Gb01315 Panicum virgatum Pavir.Gb01315 I 0.774
SapurV1A.0040s0420 Salix purpurea SapurV1A.0040s0420 I 0.774
Thhalv10011058m.g Eutrema salsugineum Thhalv10011058m.g I 0.774
Solyc04g011650.2 Solanum lycopersicum Solyc04g011650.2 I 0.771
Cagra.5588s0009 Capsella grandiflora Cagra.5588s0009 I 0.771
Carubv10000426m.g Capsella rubella Carubv10000426m.g I 0.771
POPTR_0010s20990 Populus trichocarpa POPTR_0010s20990 I 0.764
Lus10016527.g Linum usitatissimum Lus10016527.g N 0.764
Lus10040795.g Linum usitatissimum Lus10040795.g N 0.764
MDP0000119092 Malus domestica MDP0000119092 N 0.764
MDP0000138764 Malus domestica MDP0000138764 N 0.764
MDP0000222004 Malus domestica MDP0000222004 N 0.764
SapurV1A.0281s0030 Salix purpurea SapurV1A.0281s0030 I 0.764
PDK_20s1300944g001 Phoenix dactylifera PDK_20s1300944g001 N 0.764
PDK_20s1590481g002 Phoenix dactylifera PDK_20s1590481g002 N 0.764
Pavir.J14051 Panicum virgatum Pavir.J14051 I 0.763
Si009551m.g Setaria italica Si009551m.g I 0.756
PGSC0003DMG400006353 Solanum tuberosum PGSC0003DMG400006353 I 0.753
Pavir.Ea04142 Panicum virgatum Pavir.Ea04142 I 0.751
BRADI2G62170 Brachypodium distachyon BRADI2G62170 I 0.740
F775_10373 Aegilops tauschii F775_10373 I 0.740
MLOC_57410 Hordeum vulgare MLOC_57410 I 0.740
TRAES3BF045500220CFD_g Triticum aestivum TRAES3BF045500220CFD_g I 0.740
Gorai.009G098300 Gossypium raimondii Gorai.009G098300 I 0.737
Bo4g120560 Brassica oleracea Bo4g120560 I 0.711
Cla013524 Citrullus lanatus Cla013524 I 0.703
Cucsa.138770 Cucumis sativus Cucsa.138770 I 0.703
Gorai.010G200900 Gossypium raimondii Gorai.010G200900 I 0.697
Traes_3DL_FCD561E40 Triticum aestivum Traes_3DL_FCD561E40 N 0.691
Carubv10018629m.g Capsella rubella Carubv10018629m.g I 0.685
F775_13778 Aegilops tauschii F775_13778 N 0.683
MLOC_53202 Hordeum vulgare MLOC_53202 N 0.683
Traes_6AL_E94233A40 Triticum aestivum Traes_6AL_E94233A40 N 0.683
Traes_6DL_5D47DC487 Triticum aestivum Traes_6DL_5D47DC487 N 0.683
TRIUR3_01942 Triticum urartu TRIUR3_01942 N 0.683
Traes_6BL_05A7C3AAF Triticum aestivum Traes_6BL_05A7C3AAF N 0.672
BRADI3G55430 Brachypodium distachyon BRADI3G55430 N 0.671