znf281b (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000035910 T090889_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp281
M00139_2.00 		Mus musculus
NHDCCCCCHH
DDGGGGGHDN		 PBM
Badis et al.(2009)
Zfp281_0973 		0.801 0.901
ZNF281
M04509_2.00 		Homo sapiens
SCCCCTCCCCCM
KGGGGGAGGGGS		 SELEX
Yin et al.(2017)
ZNF281_eDBD_HT-SELEX 		0.801 0.901
ZNF281
M08321_2.00 		Homo sapiens
BNCCCCTCCCCC
GGGGGAGGGGNV		 ChIP-seq
Schmitges et al.(2016)
Q9Y2X9_1-4.RCADE 		0.801 0.901
Zfp281
M08025_2.00 		Mus musculus
CCCCWCCCCCMVCHB
VDGBKGGGGGWGGGG		 ChIP-seq
Chen et al.(2011)
GSE11329_zfp281 		0.801 0.901
ZNF281
M08906_2.00 		Homo sapiens
BCCCCTCCCCCHNYN
NRNDGGGGGAGGGGV		 Misc
Kulakovskiy et al.(2013)
ZN281_HUMAN.H11MO.0.A 		0.801 0.901
Zfp281
M08999_2.00 		Mus musculus
CCCCTCCCCCMMCBB
VVGKKGGGGGAGGGG		 Misc
Kulakovskiy et al.(2013)
ZN281_MOUSE.H11MO.0.A 		0.801 0.901
ZNF281
M10237_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZFP281_01 		0.801 0.901
ZNF281
M04510_2.00 		Homo sapiens
RCCCMTCCCCCR
YGGGGGAKGGGY		 SELEX
Yin et al.(2017)
ZNF281_eDBD_Methyl-HT-SELEX 		0.801 0.901
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000120960 C2H2 ZF 181 203
ENSDARP00000120960 C2H2 ZF 209 231
ENSDARP00000120960 C2H2 ZF 237 259
ENSDARP00000120960 C2H2 ZF 265 286

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
pax6.L Xenopus laevis XB-GENE-865046 I 0.000
ASIS006297 Anopheles sinensis ASIS006297 N 0.000
SSLN_0001114201 Schistocephalus solidus SSLN_0001114201 N 0.000
SPER_0003607601 Spirometra erinaceieuropaei SPER_0003607601 N 0.000
SPER_0001686401 Spirometra erinaceieuropaei SPER_0001686401 N 0.000
SPER_0000032601 Spirometra erinaceieuropaei SPER_0000032601 N 0.000
PXEA_0002437401 Protopolystoma xenopodis PXEA_0002437401 N 0.000
PXEA_0001865101 Protopolystoma xenopodis PXEA_0001865101 N 0.000
PEQ_0000587201 Parascaris equorum PEQ_0000587201 N 0.000
nOo.2.0.1.g06577 Onchocerca ochengi nOo.2.0.1.g06577 N 0.000
ECPE_0000273401 Echinostoma caproni ECPE_0000273401 N 0.000
MDOA004921 Musca domestica MDOA004921 N 0.000
ACEP15315 Atta cephalotes ACEP15315 N 0.000
AEPI000661 Anopheles epiroticus AEPI000661 N 0.000
ADIR004612 Anopheles dirus ADIR004612 N 0.000
SMU15026520 Schmidtea mediterranea SMU15026520 N 0.000
Sjc_0082940 Schistosoma japonicum Sjc_0082940 N 0.000
fgenesh4_pg.C_scaffold_33000057 Volvox carteri fgenesh4_pg.C_scaffold_33000057 N 0.000
estExt_fgeneshHS_pg.C_370078 Naegleria gruberi estExt_fgeneshHS_pg.C_370078 N 0.000
LOAG_09072 Loa loa LOAG_09072 N 0.000
HelroG172434 Helobdella robusta HelroG172434 N 0.000
ENSPCAG00000014663 Procavia capensis ENSPCAG00000014663 N 0.000
CRE03357 Caenorhabditis remanei CRE03357 N 0.000