CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshHS_pg.C_370078
(
Naegleria gruberi
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
estExt_fgeneshHS_pg.C_370078
T227411_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshHS_pg.C_370078
Homeodomain
94
126
FSEDEKKGLVDQTTLSLLQINNWFSNKRVRYKR
Links
Other
Homeodomain
family TFs
Other
Naegleria gruberi
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPCAG00000014663
Procavia capensis
ENSPCAG00000014663
N
0.696
fgenesh4_pg.C_scaffold_33000057
Volvox carteri
fgenesh4_pg.C_scaffold_33000057
N
0.668
ACEP15315
Atta cephalotes
ACEP15315
N
0.633
HelroG172434
Helobdella robusta
HelroG172434
N
0.632
DILT_0001312701
Diphyllobothrium latum
DILT_0001312701
N
0.613
SPER_0003607601
Spirometra erinaceieuropaei
SPER_0003607601
N
0.613
LOAG_09072
Loa loa
LOAG_09072
N
0.608
SNAPOd2T00028661001
Oikopleura dioica
SNAPOd2T00028661001
N
0.606