CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNAPOd2T00028661001
(
Oikopleura dioica
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SNAPOd2T00028661001
T230394_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNAPOd2T00028661001
Homeodomain
13
48
KNDQQSRKAQKATLAEKDGMSKCQITNWLSNARRRH
Links
Other
Homeodomain
family TFs
Other
Oikopleura dioica
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aqu1.230218
Amphimedon queenslandica
Aqu1.230218
N
0.633
SOCG_02522
Schizosaccharomyces octosporus
SOCG_02522
N
0.633
SOCG_06173
Schizosaccharomyces octosporus
SOCG_06173
N
0.633
SPOG_01481
Schizosaccharomyces cryophilus
SPOG_01481
N
0.633
fgenesh4_pg.C_scaffold_33000057
Volvox carteri
fgenesh4_pg.C_scaffold_33000057
N
0.616
estExt_fgeneshHS_pg.C_370078
Naegleria gruberi
estExt_fgeneshHS_pg.C_370078
N
0.606