CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF354A
(
Equus caballus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSECAG00000012431
T093181_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.816
0.980
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.816
0.980
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.816
0.980
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.768
0.916
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000010189
C2H2 ZF
215
237
YKCSKCEKTFINTSSLRKHEKNH
ENSECAP00000010189
C2H2 ZF
243
265
FKCKECSKAFNQSSALIQHQITH
ENSECAP00000010189
C2H2 ZF
271
293
YVCKECGKAFTLSTSLYKHLRTH
ENSECAP00000010189
C2H2 ZF
299
321
YRCKECGKSFSRRSGLFIHQKIH
ENSECAP00000010189
C2H2 ZF
355
377
YLCNECGNTFKSSSSLRYHQRIH
ENSECAP00000010189
C2H2 ZF
383
405
FKCSECGRAFSQSASLIQHERIH
ENSECAP00000010189
C2H2 ZF
411
433
YRCNQCGKGFTSVSRLNRHRIIH
ENSECAP00000010189
C2H2 ZF
439
461
YNCNECGKALSSHSTLIIHERIH
ENSECAP00000010189
C2H2 ZF
467
489
CKCKVCGKAFRQSSALIQHQRMH
ENSECAP00000010189
C2H2 ZF
495
517
YKCNECGKTFRCNSSLSNHQRIH
ENSECAP00000010189
C2H2 ZF
523
545
YRCEECGISFGQSSALIQHRRIH
ENSECAP00000010189
C2H2 ZF
551
573
FKCNTCGKTFRQSSSRIAHQRIH
ENSECAP00000010189
C2H2 ZF
579
601
YECNTCGKLFNHRSSLTNHYKVH
Links
Other
C2H2 ZF
family TFs
Other
Equus caballus
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PHLGIDRAFT_46901
Phlebiopsis gigantea
PHLGIDRAFT_46901
N
0.000
SERLA73DRAFT_18200
Serpula lacrymans
SERLA73DRAFT_18200
N
0.000