CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF354A
(
Homo sapiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSG00000169131
T095074_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Located in cytosol; nucleolus; and nucleoplasm. Biomarker of in situ carcinoma and seminoma. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
(Direct)
(Direct)
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
(Direct)
(Direct)
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.779
0.933
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000337122
C2H2 ZF
214
236
YKCSLCEKTFINTSSLRKHEKNH
ENSP00000337122
C2H2 ZF
242
264
FKCKECSKAFSQSSALIQHQITH
ENSP00000337122
C2H2 ZF
270
292
YICKECGKAFTLSTSLYKHLRTH
ENSP00000337122
C2H2 ZF
298
320
YRCKECGKSFSRRSGLFIHQKIH
ENSP00000337122
C2H2 ZF
354
376
YLCNECGNTFKSSSSLRYHQRIH
ENSP00000337122
C2H2 ZF
382
404
FKCSECGRAFSQSASLIQHERIH
ENSP00000337122
C2H2 ZF
410
432
YRCNECGKGFTSISRLNRHRIIH
ENSP00000337122
C2H2 ZF
438
460
YNCNECGKALSSHSTLIIHERIH
ENSP00000337122
C2H2 ZF
466
488
CKCKVCGKAFRQSSALIQHQRMH
ENSP00000337122
C2H2 ZF
494
516
YKCNECGKTFRCNSSLSNHQRIH
ENSP00000337122
C2H2 ZF
522
544
YRCEECGISFGQSSALIQHRRIH
ENSP00000337122
C2H2 ZF
550
572
FKCNTCGKTFRQSSSRIAHQRIH
ENSP00000337122
C2H2 ZF
578
600
YECNTCGKLFNHRSSLTNHYKIH
Links
Other
C2H2 ZF
family TFs
Other
Homo sapiens
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSNLEG00000001410
Nomascus leucogenys
ENSNLEG00000001410
I
0.827
ENSMMUG00000008975
Macaca mulatta
ENSMMUG00000008975
I
0.826
ZNF354A
Gorilla gorilla
ENSGGOG00000002534
I
0.826
ZNF354A
Callithrix jacchus
ENSCJAG00000012077
I
0.826
ZNF354A
Pan troglodytes
ENSPTRG00000017606
I
0.826
ENSPPYG00000016111
Pongo abelii
ENSPPYG00000016111
I
0.826
ENSPANG00000013855
Papio anubis
ENSPANG00000013855
I
0.825
ZNF354A
Tursiops truncatus
ENSTTRG00000010631
I
0.825
ZNF354A
Otolemur garnettii
ENSOGAG00000024624
I
0.824
ENSP00000300870-D85
Bos grunniens
ENSP00000300870-D85
I
0.824
ZNF354A
Microcebus murinus
ENSMICG00000006390
I
0.824
ZNF354A
Bos taurus
ENSBTAG00000006428
I
0.824
ZNF354A
Felis catus
ENSFCAG00000023911
I
0.823
ENSCSAG00000008589
Chlorocebus sabaeus
ENSCSAG00000008589
I
0.823
ZNF354A
Canis familiaris
ENSCAFG00000031000
I
0.822
ZNF354A
Myotis lucifugus
ENSMLUG00000013294
I
0.822
Myotis_brandtii_ZNF354A_10002378
Myotis brandtii
Myotis_brandtii_ZNF354A_10002378
I
0.822
ENSMPUG00000000732
Mustela putorius furo
ENSMPUG00000000732
I
0.822
ENSSTOG00000024118
Ictidomys tridecemlineatus
ENSSTOG00000024118
I
0.821
Zfp354a
Dipodomys ordii
ENSDORG00000009396
I
0.820
ZNF354A
Pteropus vampyrus
ENSPVAG00000016750
I
0.819
ENSEEUG00000008362
Erinaceus europaeus
ENSEEUG00000008362
I
0.819
ZNF354A
Oryctolagus cuniculus
ENSOCUG00000029378
I
0.818
Zfp354a
Mus musculus
ENSMUSG00000020364
I
0.818
ENSDNOG00000043806
Dasypus novemcinctus
ENSDNOG00000043806
I
0.817
ZNF354A
Equus caballus
ENSECAG00000012431
I
0.816
Zfp354a
Rattus norvegicus
ENSRNOG00000003634
I
0.813
ZNF354A
Loxodonta africana
ENSLAFG00000002909
I
0.811
ZNF354A
Ochotona princeps
ENSOPRG00000017155
I
0.794
ENSOARG00000006794
Ovis aries
ENSOARG00000006794
I
0.789
ZNF354B
Gorilla gorilla
ENSGGOG00000000628
I
0.779
ZNF354B
Homo sapiens
ENSG00000178338
D
0.779
ZNF354B
Pan troglodytes
ENSPTRG00000017609
I
0.779
ENSPPYG00000016113
Pongo abelii
ENSPPYG00000016113
I
0.777
ENSOCUG00000029238
Oryctolagus cuniculus
ENSOCUG00000029238
I
0.775
ENSCSAG00000008583
Chlorocebus sabaeus
ENSCSAG00000008583
I
0.775
ZNF354B
Felis catus
ENSFCAG00000022066
I
0.774
ENSNLEG00000001411
Nomascus leucogenys
ENSNLEG00000001411
I
0.774
ENSAMEG00000009090
Ailuropoda melanoleuca
ENSAMEG00000009090
I
0.773
ZNF354B
Cavia porcellus
ENSCPOG00000002227
I
0.773
ENSMPUG00000000728
Mustela putorius furo
ENSMPUG00000000728
I
0.773
ZNF354B
Canis familiaris
ENSCAFG00000029114
I
0.773
ENSP00000327143
Macaca fascicularis
ENSP00000327143
I
0.772
ZNF354B
Macaca mulatta
ENSMMUG00000008976
I
0.772
ZNF354B
Equus caballus
ENSECAG00000012028
I
0.772
ZNF354B
Callithrix jacchus
ENSCJAG00000018848
I
0.772
ENSPANG00000013252
Papio anubis
ENSPANG00000013252
I
0.771
ZNF354B
Dasypus novemcinctus
ENSDNOG00000031129
I
0.771
ZNF354B
Otolemur garnettii
ENSOGAG00000027501
I
0.759
ZNF354B
Pteropus vampyrus
ENSPVAG00000007675
I
0.759