ZBTB20 (Equus caballus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSECAG00000015809 T093260_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB20
M04599_2.00 		Homo sapiens
NVYATACRTYVN
NBRAYGTATRBN		 SELEX
Yin et al.(2017)
ZBTB20_eDBD_HT-SELEX 		0.827 1.000
ZBTB20
M04600_2.00 		Homo sapiens
NVYATACRTTNN
NNAAYGTATRBN		 SELEX
Yin et al.(2017)
ZBTB20_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000013402 C2H2 ZF 505 527
ENSECAP00000013402 C2H2 ZF 533 555
ENSECAP00000013402 C2H2 ZF 561 583
ENSECAP00000013402 C2H2 ZF 589 611
ENSECAP00000013402 C2H2 ZF 642 664

Links

Other C2H2 ZF family TFs
Other Equus caballus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC09G13490 Oryza punctata OPUNC09G13490 N
Pavir.Ba01676 Panicum virgatum Pavir.Ba01676 N
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N
29843.m000288 Ricinus communis 29843.m000288 N
TRIUR3_24492 Triticum urartu TRIUR3_24492 N
Traes_5DL_F17F78F73 Triticum aestivum Traes_5DL_F17F78F73 N
Traes_5BL_445FD57BE Triticum aestivum Traes_5BL_445FD57BE N
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N
Si030613m.g Setaria italica Si030613m.g N
Sb02g028780 Sorghum bicolor Sb02g028780 N
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N
OS09G0494300 Oryza sativa OS09G0494300 N
ORUFI09G16230 Oryza rufipogon ORUFI09G16230 N
ORGLA09G0115900 Oryza glaberrima ORGLA09G0115900 N
BGIOSGA029516 Oryza indica BGIOSGA029516 N
ONIVA09G15650 Oryza nivara ONIVA09G15650 N
OMERI07G04230 Oryza meridionalis OMERI07G04230 N
OLONG_025649 Oryza longistaminata OLONG_025649 N
OGLUM09G15680 Oryza glumaepatula OGLUM09G15680 N
OBART09G15030 Oryza barthii OBART09G15030 N
OB09G21610 Oryza brachyantha OB09G21610 N
MLOC_66533 Hordeum vulgare MLOC_66533 N
LPERR09G11190 Leersia perrieri LPERR09G11190 N
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N
GRMZM2G168269 Zea mays GRMZM2G168269 N
GRMZM2G025095 Zea mays GRMZM2G025095 N
F775_07408 Aegilops tauschii F775_07408 N
BRADI4G34050 Brachypodium distachyon BRADI4G34050 N
BRADI1G34320 Brachypodium distachyon BRADI1G34320 N