CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000008628
(
Ficedula albicollis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSFALG00000008628
T094283_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYNN
M08283_2.00
Homo sapiens
GRCTYTTAWTTT
AAAWTAARAGYC
ChIP-seq
Schmitges et al.(2016)
Q9NPC7_1-4.RCADE
0.817
0.973
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000008997
C2H2 ZF
307
328
VCNTCGKVFSEASSLRRHMRIH
ENSFALP00000008997
C2H2 ZF
334
356
YVCQLCGKAFTQCNQLKTHVRTH
ENSFALP00000008997
C2H2 ZF
362
385
YKCELCDKGFAQKCQLVFHSRMHH
ENSFALP00000008997
C2H2 ZF
391
413
YKCDVCNLQFATSSNLKIHARKH
ENSFALP00000008997
C2H2 ZF
419
441
YVCDRCGQRFAQASTLTYHVRRH
ENSFALP00000008997
C2H2 ZF
447
469
YVCDSCGKAFAVSSSLITHSRKH
ENSFALP00000008997
C2H2 ZF
475
497
YICGICEKSFISSGELNKHFRSH
ENSFALP00000008997
C2H2 ZF
503
526
FICEMCGNSYTDIKNLKKHKTKVH
Links
Other
C2H2 ZF
family TFs
Other
Ficedula albicollis
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy