SNAI2 (Homo sapiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSG00000019549 T094783_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00220_2.00		 Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E		 (Direct) (Direct)
SNAI2
M00221_2.00		 Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF		 (Direct) (Direct)
SNAI2
M00222_2.00		 Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I		 (Direct) (Direct)
SNAI2
M02873_2.00		 Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1		 (Direct) (Direct)
SNAI2
M04392_2.00		 Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX		 (Direct) (Direct)
SNAI2
M04393_2.00		 Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX		 (Direct) (Direct)
SNAI2
M04394_2.00		 Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX		 (Direct) (Direct)
SNAI2
M04395_2.00		 Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX		 (Direct) (Direct)
SNAI2
M08853_2.00		 Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A		 (Direct) (Direct)
SNAI2
M10102_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01		 (Direct) (Direct)
SNAI2
M10103_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02		 (Direct) (Direct)
SNAI2
M10104_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.827 1.000
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.767 0.816
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00220_2.00 C2H2 ZF 15 37
M00220_2.00 C2H2 ZF 46 68
M00220_2.00 C2H2 ZF 72 94
M00220_2.00 C2H2 ZF 100 122
M00220_2.00 C2H2 ZF 128 149
M00221_2.00 C2H2 ZF 15 37
M00221_2.00 C2H2 ZF 46 68
M00221_2.00 C2H2 ZF 72 94
M00221_2.00 C2H2 ZF 100 122
M00221_2.00 C2H2 ZF 128 149
M00222_2.00 C2H2 ZF 15 37
M00222_2.00 C2H2 ZF 46 68
M00222_2.00 C2H2 ZF 72 94
M00222_2.00 C2H2 ZF 100 122
M00222_2.00 C2H2 ZF 128 149

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000020945 C2H2 ZF 128 150
ENSP00000020945 C2H2 ZF 159 181
ENSP00000020945 C2H2 ZF 185 207
ENSP00000020945 C2H2 ZF 213 235
ENSP00000020945 C2H2 ZF 241 262
ENSP00000380034 C2H2 ZF 128 150
ENSP00000380034 C2H2 ZF 159 181
ENSP00000380034 C2H2 ZF 185 207
ENSP00000380034 C2H2 ZF 213 235
ENSP00000380034 C2H2 ZF 241 262

Links

Other C2H2 ZF family TFs
Other Homo sapiens TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZHX1 Homo sapiens ENSG00000165156 D 0.000
ZHX1 Tupaia belangeri ENSTBEG00000005916 N 0.000
ENSONIG00000014019 Oreochromis niloticus ENSONIG00000014019 N 0.000
ZHX1 Oryzias latipes ENSORLG00000001031 N 0.000
ENSPANG00000017349 Papio anubis ENSPANG00000017349 N 0.000
ZHX1 Procavia capensis ENSPCAG00000007447 N 0.000
ENSPFOG00000003808 Poecilia formosa ENSPFOG00000003808 N 0.000
ENSPFOG00000018986 Poecilia formosa ENSPFOG00000018986 N 0.000
ENSPPYG00000018856 Pongo abelii ENSPPYG00000018856 N 0.000
ZHX1 Pan troglodytes ENSPTRG00000020550 N 0.000
Zhx1 Rattus norvegicus ENSRNOG00000006412 N 0.000
ZHX1 Sorex araneus ENSSARG00000008993 N 0.000
ENSSHAG00000013245 Sarcophilus harrisii ENSSHAG00000013245 N 0.000
ZHX1 Sus scrofa ENSSSCG00000005984 N 0.000
ENSSTOG00000016571 Ictidomys tridecemlineatus ENSSTOG00000016571 N 0.000
ENSONIG00000007283 Oreochromis niloticus ENSONIG00000007283 N 0.000
ZHX1 Tetraodon nigroviridis ENSTNIG00000019079 N 0.000
ZHX1 Takifugu rubripes ENSTRUG00000010521 N 0.000
ZHX1 Takifugu rubripes ENSTRUG00000017544 N 0.000
ZHX1 Tursiops truncatus ENSTTRG00000005426 N 0.000
ENSXMAG00000001501 Xiphophorus maculatus ENSXMAG00000001501 N 0.000
ENSXMAG00000008964 Xiphophorus maculatus ENSXMAG00000008964 N 0.000
Alligator_sinensis_CCG017544.1 Alligator sinensis Alligator_sinensis_CCG017544.1 N 0.000
Cmyd_10002293 Chelonia mydas Cmyd_10002293 N 0.000
ENSBTAP00000020381-D1 Bos grunniens ENSBTAP00000020381-D1 N 0.000
ENSP00000297857 Macaca fascicularis ENSP00000297857 N 0.000
Myotis_brandtii_ZHX1_10012476 Myotis brandtii Myotis_brandtii_ZHX1_10012476 N 0.000
Pvit_18219 Pogona vitticeps Pvit_18219 N 0.000
ZHX1 Gorilla gorilla ENSGGOG00000028565 N 0.000
ENSAPLG00000010954 Anas platyrhynchos ENSAPLG00000010954 N 0.000
ZHX1 Bos taurus ENSBTAG00000015334 N 0.000
ZHX1 Canis familiaris ENSCAFG00000001001 N 0.000
ZHX1 Callithrix jacchus ENSCJAG00000000934 N 0.000
ZHX1 Dasypus novemcinctus ENSDNOG00000043739 N 0.000
ZHX1 Equus caballus ENSECAG00000023451 N 0.000
ZHX1 Erinaceus europaeus ENSEEUG00000000664 N 0.000
ENSFALG00000014380 Ficedula albicollis ENSFALG00000014380 N 0.000
ZHX1 Felis catus ENSFCAG00000013745 N 0.000
ZHX1 Gasterosteus aculeatus ENSGACG00000002041 N 0.000
ENSGACG00000005679 Gasterosteus aculeatus ENSGACG00000005679 N 0.000
ENSGALG00000016378 Gallus gallus ENSGALG00000016378 N 0.000
ENSAMEG00000018759 Ailuropoda melanoleuca ENSAMEG00000018759 N 0.000
ENSLACG00000010412 Latimeria chalumnae ENSLACG00000010412 N 0.000
ZHX1 Loxodonta africana ENSLAFG00000005884 N 0.000
ENSMEUG00000012682 Macropus eugenii ENSMEUG00000012682 N 0.000
ZHX1 Meleagris gallopavo ENSMGAG00000012584 N 0.000
ZHX1 Myotis lucifugus ENSMLUG00000013728 N 0.000
ZHX1 Macaca mulatta ENSMMUG00000006050 N 0.000
ZHX1 Monodelphis domestica ENSMODG00000002035 N 0.000
ENSMPUG00000018555 Mustela putorius furo ENSMPUG00000018555 N 0.000
Zhx1 Mus musculus ENSMUSG00000022361 N 0.000
ENSNLEG00000005308 Nomascus leucogenys ENSNLEG00000005308 N 0.000
ENSOARG00000010486 Ovis aries ENSOARG00000010486 N 0.000
ZHX1 Otolemur garnettii ENSOGAG00000027737 N 0.000