Alligator_sinensis_CCG017544.1 (Alligator sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Alligator_sinensis_CCG017544.1 T225279_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG017544.1 Homeodomain 298 340
Alligator_sinensis_CCG017544.1 Homeodomain 467 521
Alligator_sinensis_CCG017544.1 Homeodomain 573 623
Alligator_sinensis_CCG017544.1 Homeodomain 668 719
Alligator_sinensis_CCG017544.1 Homeodomain 781 827

Links

Other Homeodomain family TFs
Other Alligator sinensis TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000010954 Anas platyrhynchos ENSAPLG00000010954 N 0.848
ENSGALG00000016378 Gallus gallus ENSGALG00000016378 N 0.846
ENSFALG00000014380 Ficedula albicollis ENSFALG00000014380 N 0.835
Cmyd_10002293 Chelonia mydas Cmyd_10002293 N 0.829
ZHX1 Canis familiaris ENSCAFG00000001001 N 0.825
ZHX1 Callithrix jacchus ENSCJAG00000000934 N 0.825
ZHX1 Homo sapiens ENSG00000165156 D 0.825
ZHX1 Gorilla gorilla ENSGGOG00000028565 N 0.825
ZHX1 Macaca mulatta ENSMMUG00000006050 N 0.825
ENSNLEG00000005308 Nomascus leucogenys ENSNLEG00000005308 N 0.825
ZHX1 Otolemur garnettii ENSOGAG00000027737 N 0.825
ENSPANG00000017349 Papio anubis ENSPANG00000017349 N 0.825
ENSPPYG00000018856 Pongo abelii ENSPPYG00000018856 N 0.825
ZHX1 Pan troglodytes ENSPTRG00000020550 N 0.825
ZHX1 Sus scrofa ENSSSCG00000005984 N 0.825
ENSP00000297857 Macaca fascicularis ENSP00000297857 N 0.825
ZHX1 Felis catus ENSFCAG00000013745 N 0.824
ZHX1 Myotis lucifugus ENSMLUG00000013728 N 0.824
ZHX1 Sorex araneus ENSSARG00000008993 N 0.824
Myotis_brandtii_ZHX1_10012476 Myotis brandtii Myotis_brandtii_ZHX1_10012476 N 0.824
ZHX1 Equus caballus ENSECAG00000023451 N 0.823
ZHX1 Tupaia belangeri ENSTBEG00000005916 N 0.823
ZHX1 Bos taurus ENSBTAG00000015334 N 0.821
ZHX1 Dasypus novemcinctus ENSDNOG00000043739 N 0.821
ENSSTOG00000016571 Ictidomys tridecemlineatus ENSSTOG00000016571 N 0.821
ENSBTAP00000020381-D1 Bos grunniens ENSBTAP00000020381-D1 N 0.821
ZHX1 Erinaceus europaeus ENSEEUG00000000664 N 0.817
ZHX1 Tursiops truncatus ENSTTRG00000005426 N 0.813
ENSAMEG00000018759 Ailuropoda melanoleuca ENSAMEG00000018759 N 0.808
ENSMPUG00000018555 Mustela putorius furo ENSMPUG00000018555 N 0.808
Zhx1 Rattus norvegicus ENSRNOG00000006412 N 0.796
Zhx1 Mus musculus ENSMUSG00000022361 N 0.794
ENSSHAG00000013245 Sarcophilus harrisii ENSSHAG00000013245 N 0.793
ENSMEUG00000012682 Macropus eugenii ENSMEUG00000012682 N 0.791
ZHX1 Monodelphis domestica ENSMODG00000002035 N 0.791
ZHX1 Meleagris gallopavo ENSMGAG00000012584 N 0.790
ZHX1 Loxodonta africana ENSLAFG00000005884 N 0.777
ZHX1 Procavia capensis ENSPCAG00000007447 N 0.771
Pvit_18219 Pogona vitticeps Pvit_18219 N 0.744
ENSOARG00000010486 Ovis aries ENSOARG00000010486 N 0.707
ZHX1 Tetraodon nigroviridis ENSTNIG00000019079 N 0.706
ENSAMXG00000016320 Astyanax mexicanus ENSAMXG00000016320 N 0.682
ENSLACG00000010412 Latimeria chalumnae ENSLACG00000010412 N 0.682
ENSONIG00000007283 Oreochromis niloticus ENSONIG00000007283 N 0.682
ENSGACG00000005679 Gasterosteus aculeatus ENSGACG00000005679 N 0.679
ENSCSAG00000010631 Chlorocebus sabaeus ENSCSAG00000010631 N 0.662
ZHX1 Anolis carolinensis ENSACAG00000009608 N 0.642
ZHX1 Takifugu rubripes ENSTRUG00000017544 N 0.637
ENSPFOG00000018986 Poecilia formosa ENSPFOG00000018986 N 0.616
ENSXMAG00000008964 Xiphophorus maculatus ENSXMAG00000008964 N 0.616
ENSPSIG00000006703 Pelodiscus sinensis ENSPSIG00000006703 N 0.607
XP_002941441 Xenopus tropicalis XP_002941441 N 0.606
ZHX1 Oryctolagus cuniculus ENSOCUG00000009776 N 0.604
ENSPFOG00000003808 Poecilia formosa ENSPFOG00000003808 N 0.603
ENSXMAG00000001501 Xiphophorus maculatus ENSXMAG00000001501 N 0.603