BCL11A (Homo sapiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSG00000119866 T094871_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M00983_2.00		 Homo sapiens
NYHHRRMCVN
NBGKYYDDRN		 PBM
Liu et al.(2018)
BCL11A_23		 (Direct) (Direct)
BCL11A
M00984_2.00		 Homo sapiens
NNTGWCCN
NGGWCANN		 PBM
Liu et al.(2018)
BCL11A_456		 (Direct) (Direct)
BCL11A
M00985_2.00		 Homo sapiens
NNBGNCCNNN
NNNGGNCVNN		 PBM
Liu et al.(2018)
BCL11A_XL		 (Direct) (Direct)
BCL11A
M07926_2.00		 Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha		 (Direct) (Direct)
BCL11A
M08881_2.00		 Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A		 (Direct) (Direct)
BCL11A
M10187_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.806 0.947
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00983_2.00 C2H2 ZF 17 38
M00983_2.00 C2H2 ZF 44 66
M00984_2.00 C2H2 ZF 16 38
M00984_2.00 C2H2 ZF 44 66
M00984_2.00 C2H2 ZF 74 97
M00985_2.00 C2H2 ZF 170 193
M00985_2.00 C2H2 ZF 378 399
M00985_2.00 C2H2 ZF 405 427
M00985_2.00 C2H2 ZF 742 764
M00985_2.00 C2H2 ZF 770 792
M00985_2.00 C2H2 ZF 800 823

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000338774 C2H2 ZF 378 399
ENSP00000338774 C2H2 ZF 405 427
ENSP00000338774 C2H2 ZF 742 764
ENSP00000338774 C2H2 ZF 770 792
ENSP00000338774 C2H2 ZF 800 823
ENSP00000349300 C2H2 ZF 378 399
ENSP00000349300 C2H2 ZF 405 427
ENSP00000351307 C2H2 ZF 344 365
ENSP00000351307 C2H2 ZF 371 393
ENSP00000351307 C2H2 ZF 708 730
ENSP00000351307 C2H2 ZF 736 758
ENSP00000351307 C2H2 ZF 766 789
ENSP00000352648 C2H2 ZF 170 193
ENSP00000488390 C2H2 ZF 118 141

Links

Other C2H2 ZF family TFs
Other Homo sapiens TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RO3G_05801 Rhizopus oryzae RO3G_05801 D 0.000
RO3G_13834 Rhizopus oryzae RO3G_13834 I 0.000
estExt_Genewise1.C_80340 Mucor circinelloides estExt_Genewise1.C_80340 I 0.000
gw1.15.181.1 Phycomyces blakesleeanus gw1.15.181.1 I 0.000
gw1.23.155.1 Phycomyces blakesleeanus gw1.23.155.1 I 0.000