RO3G_05801 (Rhizopus oryzae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RO3G_05801 T078175_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RO3G_05801
M01434_2.00		 Rhizopus oryzae
NNGATYNNCN
NGNNRATCNN		 PBM
Najafabadi et al.(2015a)
pTH10221		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01434_2.00 C2H2 ZF 51 73
M01434_2.00 C2H2 ZF 79 103

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_05800 C2H2 ZF 141 163
RO3T_05800 C2H2 ZF 169 193

Links

Other C2H2 ZF family TFs
Other Rhizopus oryzae TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.15.181.1 Phycomyces blakesleeanus gw1.15.181.1 I 0.816
RO3G_13834 Rhizopus oryzae RO3G_13834 I 0.792
estExt_Genewise1.C_80340 Mucor circinelloides estExt_Genewise1.C_80340 I 0.792
gw1.23.155.1 Phycomyces blakesleeanus gw1.23.155.1 I 0.792
gw1.3.584.1 Phycomyces blakesleeanus gw1.3.584.1 I 0.782
RO3G_01826 Rhizopus oryzae RO3G_01826 I 0.769
gw1.1.1257.1 Mucor circinelloides gw1.1.1257.1 I 0.769
gw1.73.24.1 Phycomyces blakesleeanus gw1.73.24.1 I 0.768
GLOINDRAFT_221110 Rhizophagus irregularis GLOINDRAFT_221110 I 0.763
GLOINDRAFT_24118 Rhizophagus irregularis GLOINDRAFT_24118 I 0.763
GLOINDRAFT_58638 Rhizophagus irregularis GLOINDRAFT_58638 I 0.763
estExt_fgeneshMC_pg.C_10568 Mucor circinelloides estExt_fgeneshMC_pg.C_10568 I 0.763
gw1.25.121.1 Phycomyces blakesleeanus gw1.25.121.1 I 0.763
gw1.5.921.1 Mucor circinelloides gw1.5.921.1 I 0.757