GLOINDRAFT_58638 (Rhizophagus irregularis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLOINDRAFT_58638 T118196_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RO3G_05801
M01434_2.00 		Rhizopus oryzae
NNGATYNNCN
NGNNRATCNN		 PBM
Najafabadi et al.(2015a)
pTH10221 		0.763 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESA23448 C2H2 ZF 1 23
ESA23448 C2H2 ZF 29 53

Links

Other C2H2 ZF family TFs
Other Rhizophagus irregularis TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLOINDRAFT_221110 Rhizophagus irregularis GLOINDRAFT_221110 I 0.827
GLOINDRAFT_24118 Rhizophagus irregularis GLOINDRAFT_24118 I 0.827
estExt_fgeneshMC_pg.C_10568 Mucor circinelloides estExt_fgeneshMC_pg.C_10568 I 0.803
RO3G_01826 Rhizopus oryzae RO3G_01826 I 0.792
gw1.1.1257.1 Mucor circinelloides gw1.1.1257.1 I 0.792
gw1.25.121.1 Phycomyces blakesleeanus gw1.25.121.1 I 0.786
gw1.73.24.1 Phycomyces blakesleeanus gw1.73.24.1 I 0.786
estExt_Genewise1.C_80340 Mucor circinelloides estExt_Genewise1.C_80340 I 0.774
gw1.15.181.1 Phycomyces blakesleeanus gw1.15.181.1 I 0.774
RO3G_13834 Rhizopus oryzae RO3G_13834 I 0.769
PHACADRAFT_73403 Phanerochaete carnosa PHACADRAFT_73403 N 0.767
RO3G_05801 Rhizopus oryzae RO3G_05801 D 0.763
gw1.23.155.1 Phycomyces blakesleeanus gw1.23.155.1 I 0.763
gw1.6.924.1 Mucor circinelloides gw1.6.924.1 N 0.761
HETIRDRAFT_18758 Heterobasidion irregulare HETIRDRAFT_18758 N 0.759
gw1.3.911.1 Heterobasidion annosum gw1.3.911.1 N 0.759