CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000007975
(
Latimeria chalumnae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLACG00000007975
T097033_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000009033
C2H2 ZF
617
638
YKCLECGDSFALEKSLMQHYDR
ENSLACP00000009033
C2H2 ZF
645
669
VTCNHCTKNLVFYNKCSLLSHARAH
ENSLACP00000009033
C2H2 ZF
759
780
LKCLECSEVFQDETSLATHFQQ
ENSLACP00000009033
C2H2 ZF
788
810
KTCSICQMLLPNQCSFASHQRIH
ENSLACP00000009033
C2H2 ZF
847
869
YRCVHCNVVYSEVAALKSHIRSH
ENSLACP00000009033
C2H2 ZF
874
897
YKCPICPMAFKSAPSTHSHAYTQH
ENSLACP00000009033
C2H2 ZF
909
931
YKCSMCDTVFTLLPLLYRHFDQH
ENSLACP00000009033
C2H2 ZF
940
963
FKCPDCSLLYAQKQLMMDHIKSMH
ENSLACP00000009033
C2H2 ZF
1029
1052
WTCWDCDELFTQRDVYISHMRKEH
ENSLACP00000009033
C2H2 ZF
1059
1082
HPCRQCDKSFSSSHSLCRHNRIKH
Links
Other
C2H2 ZF
family TFs
Other
Latimeria chalumnae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0017s01730
Populus trichocarpa
POPTR_0017s01730
N
TCM_015228
Theobroma cacao
TCM_015228
N
30169.m006225
Ricinus communis
30169.m006225
N
cassava18974.valid.m1
Manihot esculenta
cassava18974.valid.m1
N
cassava7265.valid.m1
Manihot esculenta
cassava7265.valid.m1
N
Ciclev10004502m.g
Citrus clementina
Ciclev10004502m.g
N
evm.TU.supercontig_107.91
Carica papaya
evm.TU.supercontig_107.91
N
Gorai.006G050200
Gossypium raimondii
Gorai.006G050200
N
Gorai.006G198300
Gossypium raimondii
Gorai.006G198300
N
orange1.1g041667m.g
Citrus sinensis
orange1.1g041667m.g
N