ENSLOCG00000017185 (Lepisosteus oculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLOCG00000017185 T097779_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Osr1
M00144_2.00 		Mus musculus
NVCTHCYNN
NNRGDAGBN		 PBM
Badis et al.(2009)
Osr1_3033 		0.827 1.000
Osr1
M01174_2.00 		Mus musculus
GCTACYGT
ACRGTAGC		 PBM
Lambert et al.(2019)
pTH5339 		0.827 1.000
OSR1
M04477_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX 		0.827 1.000
OSR1
M04478_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX 		0.827 1.000
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.811 0.986
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000021240 C2H2 ZF 162 184
ENSLOCP00000021240 C2H2 ZF 190 212
ENSLOCP00000021240 C2H2 ZF 218 240

Links

Other C2H2 ZF family TFs
Other Lepisosteus oculatus TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BPC6 Arabidopsis thaliana AT5G42520 D
Lus10024313.g Linum usitatissimum Lus10024313.g I
Bostr.3148s0250 Boechera stricta Bostr.3148s0250 I
Cagra.9562s0001 Capsella grandiflora Cagra.9562s0001 I
Carubv10026720m.g Capsella rubella Carubv10026720m.g I
Ciclev10001400m.g Citrus clementina Ciclev10001400m.g I
Eucgr.D01054 Eucalyptus grandis Eucgr.D01054 I
gene08483-v1.0-hybrid Fragaria vesca gene08483-v1.0-hybrid I
Gorai.002G124900 Gossypium raimondii Gorai.002G124900 I
Lus10012389.g Linum usitatissimum Lus10012389.g I
Cucsa.159750 Cucumis sativus Cucsa.159750 I
MDP0000933138 Malus domestica MDP0000933138 I
MDP0000947167 Malus domestica MDP0000947167 I
orange1.1g018368m.g Citrus sinensis orange1.1g018368m.g I
SapurV1A.0025s0690 Salix purpurea SapurV1A.0025s0690 I
SapurV1A.0762s0100 Salix purpurea SapurV1A.0762s0100 I
Thhalv10006075m.g Eutrema salsugineum Thhalv10006075m.g I
PK03443.1 Cannabis sativa PK03443.1 I
chr1.CM0195.10.nd Lotus japonicus chr1.CM0195.10.nd I
POPTR_0005s25720 Populus trichocarpa POPTR_0005s25720 I
Bo6g076850 Brassica oleracea Bo6g076850 I
Bra003405 Brassica rapa Bra003405 I
BPC6 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8000489 I
GLYMA04G02860 Glycine max GLYMA04G02860 I
GLYMA06G02880 Glycine max GLYMA06G02880 I
MTR_1g023660 Medicago truncatula MTR_1g023660 I
PGSC0003DMG400003719 Solanum tuberosum PGSC0003DMG400003719 I
POPTR_0002s02820 Populus trichocarpa POPTR_0002s02820 I
Ocbimv22014894m.g Octopus bimaculoides Ocbimv22014894m.g I
PRUPE_ppa008316mg Prunus persica PRUPE_ppa008316mg I
Solyc04g081170.2 Solanum lycopersicum Solyc04g081170.2 I
TCM_034171 Theobroma cacao TCM_034171 I
VIT_18s0001g13730 Vitis vinifera VIT_18s0001g13730 I
Cla022781 Citrullus lanatus Cla022781 I
Pm006246 Prunus mume Pm006246 I
30170.m014145 Ricinus communis 30170.m014145 I
cassava22532.valid.m1 Manihot esculenta cassava22532.valid.m1 I