CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HIC2
(
Microcebus murinus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMICG00000005154
T098390_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN
NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.825
0.983
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN
NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.793
0.835
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.793
0.835
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN
NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.793
0.835
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH
DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.793
0.835
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000004692
C2H2 ZF
440
462
YVCIPCAKGFPSSEQLNAHVETH
ENSMICP00000004692
C2H2 ZF
500
522
FKCSVCEKTYKDPATMRQHEKTH
ENSMICP00000004692
C2H2 ZF
528
550
FPCNICGKMFTQRGTMTRHMRSH
ENSMICP00000004692
C2H2 ZF
556
578
FACDECGMRFTRQYRLTEHMRVH
ENSMICP00000004692
C2H2 ZF
584
606
YECHLCGGKFTQQRNLISHLRMH
Links
Other
C2H2 ZF
family TFs
Other
Microcebus murinus
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Zfp740
Mus musculus
ENSMUSG00000046897
D
ENSAMXG00000004859
Astyanax mexicanus
ENSAMXG00000004859
I
Alligator_sinensis_CCG005405.1
Alligator sinensis
Alligator_sinensis_CCG005405.1
I
Znf740
Rattus norvegicus
ENSRNOG00000012192
I
ENSPSIG00000003019
Pelodiscus sinensis
ENSPSIG00000003019
I
ENSPFOG00000001757
Poecilia formosa
ENSPFOG00000001757
I
ZNF740
Echinops telfairi
ENSETEG00000006127
I
ENSDORG00000002972
Dipodomys ordii
ENSDORG00000002972
I
znf740b
Danio rerio
ENSDARG00000061174
I
ZNF740
Anolis carolinensis
ENSACAG00000006993
I
ENSGMOG00000018005
Gadus morhua
ENSGMOG00000018005
N
znf740b
Gasterosteus aculeatus
ENSGACG00000009456
N
ENSONIG00000012259
Oreochromis niloticus
ENSONIG00000012259
N
znf740b
Oryzias latipes
ENSORLG00000008031
N
ENSPFOG00000001571
Poecilia formosa
ENSPFOG00000001571
N
znf740b
Tetraodon nigroviridis
ENSTNIG00000015044
N
znf740b
Takifugu rubripes
ENSTRUG00000001712
N
ENSXMAG00000008098
Xiphophorus maculatus
ENSXMAG00000008098
N