Patz1 (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000020453 T101014_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PATZ1
M08287_2.00 		Homo sapiens
CCCCDCCC
GGGHGGGG		 ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME 		0.827 1.000
PATZ1
M08864_2.00 		Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN		 Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C 		0.827 1.000
PATZ1
M10137_2.00 		Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN		 Transfac
Matys et al.(2006)
V$MAZR_01 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000050684 C2H2 ZF 292 314
ENSMUSP00000050684 C2H2 ZF 356 377
ENSMUSP00000050684 C2H2 ZF 383 405
ENSMUSP00000050684 C2H2 ZF 413 436
ENSMUSP00000050684 C2H2 ZF 442 464
ENSMUSP00000091103 C2H2 ZF 292 314
ENSMUSP00000091103 C2H2 ZF 356 377
ENSMUSP00000091103 C2H2 ZF 383 405
ENSMUSP00000091103 C2H2 ZF 413 436
ENSMUSP00000091103 C2H2 ZF 442 464
ENSMUSP00000092043 C2H2 ZF 292 314
ENSMUSP00000092043 C2H2 ZF 356 377
ENSMUSP00000092043 C2H2 ZF 383 405
ENSMUSP00000092043 C2H2 ZF 413 436
ENSMUSP00000105670 C2H2 ZF 292 314
ENSMUSP00000105670 C2H2 ZF 356 377
ENSMUSP00000105670 C2H2 ZF 383 405
ENSMUSP00000105670 C2H2 ZF 413 436
ENSMUSP00000105670 C2H2 ZF 442 464
ENSMUSP00000105670 C2H2 ZF 496 518

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HES1 Homo sapiens ENSG00000114315 D 0.000
Hes1 Mus musculus ENSMUSG00000022528 D 0.000
HES1 Anolis carolinensis ENSACAG00000001611 I 0.000
ENSAMEG00000015855 Ailuropoda melanoleuca ENSAMEG00000015855 I 0.000
ENSAMXG00000012278 Astyanax mexicanus ENSAMXG00000012278 I 0.000
ENSAMXG00000012796 Astyanax mexicanus ENSAMXG00000012796 I 0.000
HES1 Bos taurus ENSBTAG00000000569 I 0.000
HES4 Bos taurus ENSBTAG00000014705 I 0.000
HES4 Canis familiaris ENSCAFG00000019350 I 0.000
HES1 Choloepus hoffmanni ENSCHOG00000005633 I 0.000
HES1 Callithrix jacchus ENSCJAG00000014044 I 0.000
ENSCPOG00000021042 Cavia porcellus ENSCPOG00000021042 I 0.000
ENSCSAG00000000668 Chlorocebus sabaeus ENSCSAG00000000668 I 0.000
ENSCSAG00000008869 Chlorocebus sabaeus ENSCSAG00000008869 I 0.000
her6 Danio rerio ENSDARG00000006514 I 0.000
her9 Danio rerio ENSDARG00000056438 I 0.000
HES4 Dasypus novemcinctus ENSDNOG00000024495 I 0.000
HES1 Dasypus novemcinctus ENSDNOG00000039639 I 0.000
ENSDORG00000014783 Dipodomys ordii ENSDORG00000014783 I 0.000
HES1 Equus caballus ENSECAG00000026945 I 0.000
ENSFALG00000007228 Ficedula albicollis ENSFALG00000007228 I 0.000
HES4 Homo sapiens ENSG00000188290 I 0.000
her9 Gasterosteus aculeatus ENSGACG00000007334 I 0.000
her6 Gasterosteus aculeatus ENSGACG00000009264 I 0.000
ENSGACG00000015969 Gasterosteus aculeatus ENSGACG00000015969 I 0.000
hairy1 Gallus gallus ENSGALG00000002055 I 0.000
HES1 Gorilla gorilla ENSGGOG00000008521 I 0.000
HES4 Gorilla gorilla ENSGGOG00000013399 I 0.000
ENSGMOG00000000092 Gadus morhua ENSGMOG00000000092 I 0.000
ENSGMOG00000015708 Gadus morhua ENSGMOG00000015708 I 0.000
ENSGMOG00000018048 Gadus morhua ENSGMOG00000018048 I 0.000
ENSLACG00000009729 Latimeria chalumnae ENSLACG00000009729 I 0.000
ENSLACG00000017918 Latimeria chalumnae ENSLACG00000017918 I 0.000
HES1 Loxodonta africana ENSLAFG00000008932 I 0.000
ENSLOCG00000004988 Lepisosteus oculatus ENSLOCG00000004988 I 0.000
ENSLOCG00000007298 Lepisosteus oculatus ENSLOCG00000007298 I 0.000
ENSMEUG00000013941 Macropus eugenii ENSMEUG00000013941 I 0.000
HES1 Meleagris gallopavo ENSMGAG00000007566 I 0.000
ENSMICG00000012430 Microcebus murinus ENSMICG00000012430 I 0.000
HES4 Microcebus murinus ENSMICG00000015660 I 0.000
HES1 Myotis lucifugus ENSMLUG00000008549 I 0.000
HES4 Macaca mulatta ENSMMUG00000001817 I 0.000
HES4 Monodelphis domestica ENSMODG00000018647 I 0.000
ENSMODG00000019833 Monodelphis domestica ENSMODG00000019833 I 0.000
ENSMPUG00000003643 Mustela putorius furo ENSMPUG00000003643 I 0.000
ENSMPUG00000006870 Mustela putorius furo ENSMPUG00000006870 I 0.000
ENSMPUG00000013915 Mustela putorius furo ENSMPUG00000013915 I 0.000
ENSNLEG00000006836 Nomascus leucogenys ENSNLEG00000006836 I 0.000
HES1 Ornithorhynchus anatinus ENSOANG00000015683 I 0.000
ENSOARG00000007304 Ovis aries ENSOARG00000007304 I 0.000
ENSOARG00000020422 Ovis aries ENSOARG00000020422 I 0.000
HES1 Oryctolagus cuniculus ENSOCUG00000009363 I 0.000
HES1 Otolemur garnettii ENSOGAG00000032425 I 0.000
ENSONIG00000002398 Oreochromis niloticus ENSONIG00000002398 I 0.000
ENSONIG00000002619 Oreochromis niloticus ENSONIG00000002619 I 0.000
ENSONIG00000010641 Oreochromis niloticus ENSONIG00000010641 I 0.000
ENSORLG00000004584 Oryzias latipes ENSORLG00000004584 I 0.000
hes4 Oryzias latipes ENSORLG00000005453 I 0.000
hes1 Oryzias latipes ENSORLG00000007556 I 0.000
ENSPANG00000018250 Papio anubis ENSPANG00000018250 I 0.000
ENSPANG00000024455 Papio anubis ENSPANG00000024455 I 0.000
HES2 Procavia capensis ENSPCAG00000007135 I 0.000
ENSPFOG00000016659 Poecilia formosa ENSPFOG00000016659 I 0.000
ENSPFOG00000019084 Poecilia formosa ENSPFOG00000019084 I 0.000
ENSPFOG00000022586 Poecilia formosa ENSPFOG00000022586 I 0.000
ENSPPYG00000014419 Pongo abelii ENSPPYG00000014419 I 0.000
ENSPSIG00000013040 Pelodiscus sinensis ENSPSIG00000013040 I 0.000
HES1 Pan troglodytes ENSPTRG00000015753 I 0.000
ENSPTRG00000023647 Pan troglodytes ENSPTRG00000023647 I 0.000
ENSPTRG00000039445 Pan troglodytes ENSPTRG00000039445 I 0.000
HES4 Pteropus vampyrus ENSPVAG00000010837 I 0.000
HES1 Pteropus vampyrus ENSPVAG00000015487 I 0.000
Hes1 Rattus norvegicus ENSRNOG00000001720 I 0.000
ENSSSCG00000024430 Sus scrofa ENSSSCG00000024430 I 0.000
ENSSSCG00000026362 Sus scrofa ENSSSCG00000026362 I 0.000
ENSSTOG00000026531 Ictidomys tridecemlineatus ENSSTOG00000026531 I 0.000
HES4 Taeniopygia guttata ENSTGUG00000009134 I 0.000
ENSTNIG00000007837 Tetraodon nigroviridis ENSTNIG00000007837 I 0.000
her9 Tetraodon nigroviridis ENSTNIG00000015161 I 0.000
her6 Tetraodon nigroviridis ENSTNIG00000015567 I 0.000
ENSTRUG00000001493 Takifugu rubripes ENSTRUG00000001493 I 0.000
her9 Takifugu rubripes ENSTRUG00000009985 I 0.000
her6 Takifugu rubripes ENSTRUG00000017395 I 0.000
HES1 Tursiops truncatus ENSTTRG00000001687 I 0.000
ENSXMAG00000003794 Xiphophorus maculatus ENSXMAG00000003794 I 0.000
ENSXMAG00000004442 Xiphophorus maculatus ENSXMAG00000004442 I 0.000
Alligator_sinensis_CCG015374.1 Alligator sinensis Alligator_sinensis_CCG015374.1 I 0.000
ENSBTAP00000000742-D1 Bos grunniens ENSBTAP00000000742-D1 I 0.000
ENSBTAP00000028261-D1 Bos grunniens ENSBTAP00000028261-D1 I 0.000
ENSP00000232424 Macaca fascicularis ENSP00000232424 I 0.000
Myotis_brandtii_Hes1_10032756 Myotis brandtii Myotis_brandtii_Hes1_10032756 I 0.000
Ogr04559 Ophisaurus gracilis Ogr04559 I 0.000
Ogr11517 Ophisaurus gracilis Ogr11517 I 0.000
Pvit_06331 Pogona vitticeps Pvit_06331 I 0.000
Pvit_14102 Pogona vitticeps Pvit_14102 I 0.000
estExt_fgenesh2_kg.C_140002 Branchiostoma floridae estExt_fgenesh2_kg.C_140002 I 0.000
estExt_fgenesh2_kg.C_9080002 Branchiostoma floridae estExt_fgenesh2_kg.C_9080002 I 0.000
estExt_fgenesh2_pg.C_2610041 Branchiostoma floridae estExt_fgenesh2_pg.C_2610041 I 0.000
estExt_fgenesh2_pg.C_2610044 Branchiostoma floridae estExt_fgenesh2_pg.C_2610044 I 0.000
estExt_fgenesh2_pg.C_3520029 Branchiostoma floridae estExt_fgenesh2_pg.C_3520029 I 0.000
estExt_fgenesh2_pg.C_3520032 Branchiostoma floridae estExt_fgenesh2_pg.C_3520032 I 0.000
estExt_fgenesh2_pg.C_3670032 Branchiostoma floridae estExt_fgenesh2_pg.C_3670032 I 0.000
estExt_GenewiseH_1.C_2610051 Branchiostoma floridae estExt_GenewiseH_1.C_2610051 I 0.000
estExt_GenewiseH_1.C_960240 Branchiostoma floridae estExt_GenewiseH_1.C_960240 I 0.000
AAY96799 Xenopus tropicalis AAY96799 I 0.000
AAZ04408 Xenopus tropicalis AAZ04408 I 0.000
hes4 Xenopus tropicalis XB-GENE-487830 I 0.000
hes1 Xenopus tropicalis XB-GENE-487995 I 0.000
hes4.S Xenopus laevis XB-GENE-6256031 I 0.000
hes1.S Xenopus laevis XB-GENE-6256448 I 0.000
hes4.L Xenopus laevis XB-GENE-865740 I 0.000
hes1.L Xenopus laevis XB-GENE-865756 I 0.000