CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prdm14
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000008105
T104827_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000010172
C2H2 ZF
314
335
YKCDRCGKVFAYRYYRDKHLKY
ENSORLP00000010172
C2H2 ZF
346
369
FPCHLCNRSFEKRDRLRIHVLHVH
ENSORLP00000010172
C2H2 ZF
375
397
HKCSVCGKSFSQSSSLNKHMRVH
ENSORLP00000010172
C2H2 ZF
403
425
YKCVYCNKAFTASSILRTHIRQH
ENSORLP00000010172
C2H2 ZF
431
454
FKCKHCGKAFASHAAHDSHVRRTH
ENSORLP00000010172
C2H2 ZF
460
482
HLCELCGASFQKEQELRLHTKSH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
prdm14
Danio rerio
ENSDARG00000045371
N
0.762
prdm14
Gasterosteus aculeatus
ENSGACG00000002829
N
0.776
ENSONIG00000014250
Oreochromis niloticus
ENSONIG00000014250
N
0.779
ENSPFOG00000011806
Poecilia formosa
ENSPFOG00000011806
N
0.773
ENSTNIG00000008194
Tetraodon nigroviridis
ENSTNIG00000008194
N
0.776
ENSXMAG00000010249
Xiphophorus maculatus
ENSXMAG00000010249
N
0.773