CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prdm14
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000045371
T090932_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000066719
C2H2 ZF
297
318
FKCDRCGKVFAYKYYRDKHLKY
ENSDARP00000066719
C2H2 ZF
329
352
FPCHLCNRSFEKRDRLRIHILHVH
ENSDARP00000066719
C2H2 ZF
358
380
HKCSVCGKSFSQSSSLNKHMRVH
ENSDARP00000066719
C2H2 ZF
386
408
YKCVYCNKAFTASSILRTHIRQH
ENSDARP00000066719
C2H2 ZF
414
437
FKCKHCGKAFASHAAHDSHVRRTH
ENSDARP00000066719
C2H2 ZF
443
465
LSCDVCGATFQEAQELKYHMKAH
ENSDARP00000110909
C2H2 ZF
348
369
FKCDRCGKVFAYKYYRDKHLKY
ENSDARP00000110909
C2H2 ZF
380
403
FPCHLCNRSFEKRDRLRIHILHVH
ENSDARP00000110909
C2H2 ZF
409
431
HKCSVCGKSFSQSSSLNKHMRVH
ENSDARP00000110909
C2H2 ZF
437
459
YKCVYCNKAFTASSILRTHIRQH
ENSDARP00000110909
C2H2 ZF
465
488
FKCKHCGKAFASHAAHDSHVRRTH
ENSDARP00000110909
C2H2 ZF
494
516
LSCDVCGATFQEAQELKYHMKAH
ENSDARP00000136513
C2H2 ZF
348
369
FKCDRCGKVFAYKYYRDKHLKY
ENSDARP00000136513
C2H2 ZF
380
403
FPCHLCNRSFEKRDRLRIHILHVH
ENSDARP00000136513
C2H2 ZF
409
431
HKCSVCGKSFSQSSSLNKHMRVH
ENSDARP00000136513
C2H2 ZF
437
459
YKCVYCNKAFTASSILRTHIRQH
ENSDARP00000136513
C2H2 ZF
465
488
FKCKHCGKAFASHAAHDSHVRRTH
ENSDARP00000136513
C2H2 ZF
494
516
LSCDVCGATFQEAQELKYHMKAH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSONIG00000014250
Oreochromis niloticus
ENSONIG00000014250
N
0.802
ENSPFOG00000011806
Poecilia formosa
ENSPFOG00000011806
N
0.799
ENSXMAG00000010249
Xiphophorus maculatus
ENSXMAG00000010249
N
0.799
prdm14
Gasterosteus aculeatus
ENSGACG00000002829
N
0.789
ENSTNIG00000008194
Tetraodon nigroviridis
ENSTNIG00000008194
N
0.769
prdm14
Oryzias latipes
ENSORLG00000008105
N
0.762