ENSPSIG00000011751 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000011751 T107656_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Osr1
M00144_2.00 		Mus musculus
NVCTHCYNN
NNRGDAGBN		 PBM
Badis et al.(2009)
Osr1_3033 		0.821 0.986
Osr1
M01174_2.00 		Mus musculus
GCTACYGT
ACRGTAGC		 PBM
Lambert et al.(2019)
pTH5339 		0.821 0.986
OSR1
M04477_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX 		0.821 0.986
OSR1
M04478_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX 		0.821 0.986
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.805 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000013064 C2H2 ZF 169 191
ENSPSIP00000013064 C2H2 ZF 197 221
ENSPSIP00000013064 C2H2 ZF 227 249

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BPC6 Arabidopsis thaliana AT5G42520 D 0.000
Lus10012389.g Linum usitatissimum Lus10012389.g I 0.000
Ocbimv22014894m.g Octopus bimaculoides Ocbimv22014894m.g I 0.000
Bostr.3148s0250 Boechera stricta Bostr.3148s0250 I 0.000
Cagra.9562s0001 Capsella grandiflora Cagra.9562s0001 I 0.000
Carubv10026720m.g Capsella rubella Carubv10026720m.g I 0.000
Ciclev10001400m.g Citrus clementina Ciclev10001400m.g I 0.000
Eucgr.D01054 Eucalyptus grandis Eucgr.D01054 I 0.000
gene08483-v1.0-hybrid Fragaria vesca gene08483-v1.0-hybrid I 0.000
Gorai.002G124900 Gossypium raimondii Gorai.002G124900 I 0.000
Cucsa.159750 Cucumis sativus Cucsa.159750 I 0.000
Lus10024313.g Linum usitatissimum Lus10024313.g I 0.000
MDP0000947167 Malus domestica MDP0000947167 I 0.000
orange1.1g018368m.g Citrus sinensis orange1.1g018368m.g I 0.000
SapurV1A.0025s0690 Salix purpurea SapurV1A.0025s0690 I 0.000
SapurV1A.0762s0100 Salix purpurea SapurV1A.0762s0100 I 0.000
Thhalv10006075m.g Eutrema salsugineum Thhalv10006075m.g I 0.000
PK03443.1 Cannabis sativa PK03443.1 I 0.000
chr1.CM0195.10.nd Lotus japonicus chr1.CM0195.10.nd I 0.000
POPTR_0005s25720 Populus trichocarpa POPTR_0005s25720 I 0.000
Bo6g076850 Brassica oleracea Bo6g076850 I 0.000
Bra003405 Brassica rapa Bra003405 I 0.000
BPC6 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8000489 I 0.000
GLYMA04G02860 Glycine max GLYMA04G02860 I 0.000
GLYMA06G02880 Glycine max GLYMA06G02880 I 0.000
MTR_1g023660 Medicago truncatula MTR_1g023660 I 0.000
PGSC0003DMG400003719 Solanum tuberosum PGSC0003DMG400003719 I 0.000
POPTR_0002s02820 Populus trichocarpa POPTR_0002s02820 I 0.000
cassava22532.valid.m1 Manihot esculenta cassava22532.valid.m1 I 0.000
PRUPE_ppa008316mg Prunus persica PRUPE_ppa008316mg I 0.000
Solyc04g081170.2 Solanum lycopersicum Solyc04g081170.2 I 0.000
TCM_034171 Theobroma cacao TCM_034171 I 0.000
VIT_18s0001g13730 Vitis vinifera VIT_18s0001g13730 I 0.000
Cla022781 Citrullus lanatus Cla022781 I 0.000
Pm006246 Prunus mume Pm006246 I 0.000
30170.m014145 Ricinus communis 30170.m014145 I 0.000