OSR1 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000011683 T108070_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Osr1
M00144_2.00 		Mus musculus
NVCTHCYNN
NNRGDAGBN		 PBM
Badis et al.(2009)
Osr1_3033 		0.827 1.000
Osr1
M01174_2.00 		Mus musculus
GCTACYGT
ACRGTAGC		 PBM
Lambert et al.(2019)
pTH5339 		0.827 1.000
OSR1
M04477_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX 		0.827 1.000
OSR1
M04478_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX 		0.827 1.000
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.811 0.986
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000020079 C2H2 ZF 175 197
ENSPTRP00000020079 C2H2 ZF 203 225
ENSPTRP00000020079 C2H2 ZF 231 253

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.D01435 Eucalyptus grandis Eucgr.D01435 N 0.000
chr6.LjT16B20.120.nc Lotus japonicus chr6.LjT16B20.120.nc N 0.000
chr4.CM0288.500.nc Lotus japonicus chr4.CM0288.500.nc N 0.000
PK04573.1 Cannabis sativa PK04573.1 N 0.000
SapurV1A.0359s0250 Salix purpurea SapurV1A.0359s0250 N 0.000
orange1.1g008984m.g Citrus sinensis orange1.1g008984m.g N 0.000
MDP0000254936 Malus domestica MDP0000254936 N 0.000
Lus10017554.g Linum usitatissimum Lus10017554.g N 0.000
Lus10000539.g Linum usitatissimum Lus10000539.g N 0.000
Gorai.010G249400 Gossypium raimondii Gorai.010G249400 N 0.000
Gorai.009G184100 Gossypium raimondii Gorai.009G184100 N 0.000
evm.TU.supercontig_27.254 Carica papaya evm.TU.supercontig_27.254 N 0.000
SCL13 Arabidopsis lyrata fgenesh2_kg.7__2586__AT4G17230.1 N 0.000
Ciclev10014811m.g Citrus clementina Ciclev10014811m.g N 0.000
27529.m000047 Ricinus communis 27529.m000047 N 0.000
Pm012494 Prunus mume Pm012494 N 0.000
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.000
TCM_030393 Theobroma cacao TCM_030393 N 0.000
PRUPE_ppa003910mg Prunus persica PRUPE_ppa003910mg N 0.000
POPTR_0016s01110 Populus trichocarpa POPTR_0016s01110 N 0.000
POPTR_0006s01720 Populus trichocarpa POPTR_0006s01720 N 0.000
GLYMA15G12320 Glycine max GLYMA15G12320 N 0.000
GLYMA09G01440 Glycine max GLYMA09G01440 N 0.000