REST (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000016087 T108132_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REST
M08084_2.00 		Homo sapiens
GSHGCTGTCCRWGGTSCTGAH
DTCAGSACCWYGGACAGCDSC		 ChIP-seq
Mathelier et al.(2014)
MA0138.2 		0.827 1.000
REST
M07846_2.00 		Homo sapiens
TCCVHGGTGCTGAM
KTCAGCACCDBGGA		 ChIP-seq
Gerstein et al.(2012)
GM12878_NRSF_HudsonAlpha 		0.827 1.000
REST
M07847_2.00 		Homo sapiens
GCTGTCCRHGGTGCT
AGCACCDYGGACAGC		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_NRSF_HudsonAlpha 		0.827 1.000
REST
M07848_2.00 		Homo sapiens
HGCTGTCCRWGGTSCT
AGSACCWYGGACAGCD		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_NRSF_HudsonAlpha 		0.827 1.000
REST
M07849_2.00 		Homo sapiens
TGTCCRHGGTGCTGA
TCAGCACCDYGGACA		 ChIP-seq
Gerstein et al.(2012)
HepG2_NRSF_HudsonAlpha 		0.827 1.000
REST
M07850_2.00 		Homo sapiens
TGTCCVHGGTGCTGA
TCAGCACCDBGGACA		 ChIP-seq
Gerstein et al.(2012)
HTB-11_NRSF_HudsonAlpha 		0.827 1.000
REST
M07851_2.00 		Homo sapiens
CTGTCCVHGGTGCTGA
TCAGCACCDBGGACAG		 ChIP-seq
Gerstein et al.(2012)
K562_NRSF_HudsonAlpha 		0.827 1.000
REST
M07852_2.00 		Homo sapiens
GSHGCTGTCCRHGGTGCTGAM
KTCAGCACCDYGGACAGCDSC		 ChIP-seq
Gerstein et al.(2012)
PANC-1_NRSF_HudsonAlpha 		0.827 1.000
REST
M07853_2.00 		Homo sapiens
CTGTCCRHGGTGCTG
CAGCACCDYGGACAG		 ChIP-seq
Gerstein et al.(2012)
PFSK-1_NRSF_HudsonAlpha 		0.827 1.000
REST
M07854_2.00 		Homo sapiens
GSHGCTGTCCRHGGT
ACCDYGGACAGCDSC		 ChIP-seq
Gerstein et al.(2012)
U87_NRSF_HudsonAlpha 		0.827 1.000
REST
M08861_2.00 		Homo sapiens
DGSHGCTGTCCRHGGTGCTGAH
DTCAGCACCDYGGACAGCDSCH		 Misc
Kulakovskiy et al.(2013)
REST_HUMAN.H11MO.0.A 		0.827 1.000
REST
M09501_2.00 		Homo sapiens
GGHGCTGTCCRWGGTGCTGA
TCAGCACCWYGGACAGCDCC		 Misc
Heinz et al.(2010)
Jurkat-NRSF 		0.827 1.000
REST
M10116_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRSE_B 		0.827 1.000
REST
M10117_2.00 		Homo sapiens
GSYKCTGTCCGYGGTGCTGAA
TTCAGCACCRCGGACAGMRSC		 Transfac
Matys et al.(2006)
V$NRSF_01 		0.827 1.000
REST
M10118_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REST_01 		0.827 1.000
REST
M10119_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REST_04 		0.827 1.000
REST
M10120_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REST_05 		0.827 1.000
REST
M10121_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REST_06 		0.827 1.000
REST
M10122_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REST_10 		0.827 1.000
REST
M10123_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REST_12 		0.827 1.000
REST
M10124_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REST_Q5 		0.827 1.000
Rest
M10362_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRSF_Q4 		0.826 0.988
Rest
M08983_2.00 		Mus musculus
DGBHGCTGTCCDHGGTSCTGRH
DYCAGSACCDHGGACAGCDVCH		 Misc
Kulakovskiy et al.(2013)
REST_MOUSE.H11MO.0.A 		0.820 0.981
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000039730 C2H2 ZF 216 238
ENSPTRP00000039730 C2H2 ZF 248 270
ENSPTRP00000039730 C2H2 ZF 276 298
ENSPTRP00000039730 C2H2 ZF 304 326
ENSPTRP00000039730 C2H2 ZF 332 355
ENSPTRP00000039730 C2H2 ZF 361 383
ENSPTRP00000039730 C2H2 ZF 389 412
ENSPTRP00000057802 C2H2 ZF 216 238
ENSPTRP00000057802 C2H2 ZF 248 270
ENSPTRP00000057802 C2H2 ZF 276 298
ENSPTRP00000057802 C2H2 ZF 309 332
ENSPTRP00000057802 C2H2 ZF 338 360
ENSPTRP00000057802 C2H2 ZF 366 389
ENSPTRP00000060323 C2H2 ZF 159 181
ENSPTRP00000060323 C2H2 ZF 216 238
ENSPTRP00000060323 C2H2 ZF 248 270
ENSPTRP00000060323 C2H2 ZF 276 298
ENSPTRP00000060323 C2H2 ZF 304 326
ENSPTRP00000060323 C2H2 ZF 332 355
ENSPTRP00000060323 C2H2 ZF 361 383
ENSPTRP00000060323 C2H2 ZF 389 412

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10016354m.g Citrus clementina Ciclev10016354m.g N
Solyc08g013980.2 Solanum lycopersicum Solyc08g013980.2 N
TCM_002550 Theobroma cacao TCM_002550 N
Traes_2AL_6990211D0 Triticum aestivum Traes_2AL_6990211D0 N
Traes_2BL_7B5109B55 Triticum aestivum Traes_2BL_7B5109B55 N
Traes_2DL_B72450387 Triticum aestivum Traes_2DL_B72450387 N
Cla012999 Citrullus lanatus Cla012999 N
30005.m001261 Ricinus communis 30005.m001261 N
cassava24109.valid.m1 Manihot esculenta cassava24109.valid.m1 N
mgf025428m Mimulus guttatus mgf025428m N
Aquca_108_00051 Aquilegia coerulea Aquca_108_00051 N
Si010917m.g Setaria italica Si010917m.g N
Gorai.004G060500 Gossypium raimondii Gorai.004G060500 N
Gorai.007G162200 Gossypium raimondii Gorai.007G162200 N
Gorai.N001000 Gossypium raimondii Gorai.N001000 N
Lus10025581.g Linum usitatissimum Lus10025581.g N
Lus10025582.g Linum usitatissimum Lus10025582.g N
Lus10027045.g Linum usitatissimum Lus10027045.g N
orange1.1g024388m.g Citrus sinensis orange1.1g024388m.g N
Pavir.Ga01503 Panicum virgatum Pavir.Ga01503 N
Pavir.J08977 Panicum virgatum Pavir.J08977 N
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N
LPERR04G13890 Leersia perrieri LPERR04G13890 N
Bo1g147290 Brassica oleracea Bo1g147290 N
Bo3g061340 Brassica oleracea Bo3g061340 N
Bra001258 Brassica rapa Bra001258 N
Bra029658 Brassica rapa Bra029658 N
Bra040015 Brassica rapa Bra040015 N
F775_32546 Aegilops tauschii F775_32546 N
GRMZM2G053557 Zea mays GRMZM2G053557 N
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N
GSMUA_Achr6G28720_001 Musa acuminata GSMUA_Achr6G28720_001 N
GSMUA_Achr9G08210_001 Musa acuminata GSMUA_Achr9G08210_001 N
BGIOSGA014805 Oryza indica BGIOSGA014805 N
OBART04G17310 Oryza barthii OBART04G17310 N
OGLUM04G17350 Oryza glumaepatula OGLUM04G17350 N
OLONG_009317 Oryza longistaminata OLONG_009317 N
OMERI04G14610 Oryza meridionalis OMERI04G14610 N
OPUNC04G15120 Oryza punctata OPUNC04G15120 N
ORGLA04G0144300 Oryza glaberrima ORGLA04G0144300 N
ORUFI04G18740 Oryza rufipogon ORUFI04G18740 N
PGSC0003DMG400020996 Solanum tuberosum PGSC0003DMG400020996 N
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N
Sb06g021360 Sorghum bicolor Sb06g021360 N