Bra040015 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra040015 T268151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra040015.1-P Myb 56 104

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g147290 Brassica oleracea Bo1g147290 N 0.894
Bo3g061340 Brassica oleracea Bo3g061340 N 0.875
Bra001258 Brassica rapa Bra001258 N 0.875
Bra029658 Brassica rapa Bra029658 N 0.875
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N 0.875
AT3G07565 Arabidopsis thaliana AT3G07565 N 0.820
cassava24109.valid.m1 Manihot esculenta cassava24109.valid.m1 N 0.808
30005.m001261 Ricinus communis 30005.m001261 N 0.801
fgenesh2_kg.3__781__AT3G07565.3 Arabidopsis lyrata fgenesh2_kg.3__781__AT3G07565.3 N 0.786
Bostr.22252s0273 Boechera stricta Bostr.22252s0273 N 0.786
Cagra.0133s0101 Capsella grandiflora Cagra.0133s0101 N 0.786
Carubv10014434m.g Capsella rubella Carubv10014434m.g N 0.786
TCM_002550 Theobroma cacao TCM_002550 N 0.783
Gorai.N001000 Gossypium raimondii Gorai.N001000 N 0.783
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N 0.772
Solyc09g020000.2 Solanum lycopersicum Solyc09g020000.2 N 0.758
Ciclev10016354m.g Citrus clementina Ciclev10016354m.g N 0.744
orange1.1g024388m.g Citrus sinensis orange1.1g024388m.g N 0.744
Gorai.007G162200 Gossypium raimondii Gorai.007G162200 N 0.731
mgf025428m Mimulus guttatus mgf025428m N 0.730
Gorai.004G060500 Gossypium raimondii Gorai.004G060500 N 0.725
Gorai.011G138900 Gossypium raimondii Gorai.011G138900 N 0.707
BGIOSGA014805 Oryza indica BGIOSGA014805 N 0.696
LPERR04G13890 Leersia perrieri LPERR04G13890 N 0.696
OBART04G17310 Oryza barthii OBART04G17310 N 0.696
OGLUM04G17350 Oryza glumaepatula OGLUM04G17350 N 0.696
OLONG_009317 Oryza longistaminata OLONG_009317 N 0.696
OMERI04G14610 Oryza meridionalis OMERI04G14610 N 0.696
ONIVA04G15620 Oryza nivara ONIVA04G15620 N 0.696
ORGLA04G0144300 Oryza glaberrima ORGLA04G0144300 N 0.696
ORUFI04G18740 Oryza rufipogon ORUFI04G18740 N 0.696
F775_32546 Aegilops tauschii F775_32546 N 0.695
Traes_2BL_7B5109B55 Triticum aestivum Traes_2BL_7B5109B55 N 0.695
Traes_2DL_B72450387 Triticum aestivum Traes_2DL_B72450387 N 0.695
Lus10025582.g Linum usitatissimum Lus10025582.g N 0.695
TCM_019960 Theobroma cacao TCM_019960 N 0.694
TCM_019968 Theobroma cacao TCM_019968 N 0.694
PGSC0003DMG400020996 Solanum tuberosum PGSC0003DMG400020996 N 0.688
Solyc08g013980.2 Solanum lycopersicum Solyc08g013980.2 N 0.688
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N 0.687
Traes_2AL_6990211D0 Triticum aestivum Traes_2AL_6990211D0 N 0.687
OPUNC04G15120 Oryza punctata OPUNC04G15120 N 0.685
Lus10025581.g Linum usitatissimum Lus10025581.g N 0.683
Lus10027045.g Linum usitatissimum Lus10027045.g N 0.683
Cla012999 Citrullus lanatus Cla012999 N 0.680
GRMZM2G053557 Zea mays GRMZM2G053557 N 0.667
Sb06g021360 Sorghum bicolor Sb06g021360 N 0.667
Si010917m.g Setaria italica Si010917m.g N 0.667
Ciclev10021850m.g Citrus clementina Ciclev10021850m.g N 0.667
orange1.1g025458m.g Citrus sinensis orange1.1g025458m.g N 0.667
Pavir.Ga01503 Panicum virgatum Pavir.Ga01503 N 0.667