CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.22252s0273
(
Boechera stricta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Bostr.22252s0273
T285762_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.22252s0273.1.p
Myb
63
111
STDWTNEEQSLLEDLLVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRW
Bostr.22252s0273.2.p
Myb
63
111
STDWTNEEQSLLEDLLVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRW
Links
Other
Myb/SANT
family TFs
Other
Boechera stricta
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT3G07565
Arabidopsis thaliana
AT3G07565
N
0.875
fgenesh2_kg.3__781__AT3G07565.3
Arabidopsis lyrata
fgenesh2_kg.3__781__AT3G07565.3
N
0.875
Cagra.0133s0101
Capsella grandiflora
Cagra.0133s0101
N
0.875
Carubv10014434m.g
Capsella rubella
Carubv10014434m.g
N
0.875
Solyc09g020000.2
Solanum lycopersicum
Solyc09g020000.2
N
0.847
Bo3g061340
Brassica oleracea
Bo3g061340
N
0.786
Bra001258
Brassica rapa
Bra001258
N
0.786
Bra029658
Brassica rapa
Bra029658
N
0.786
Bra040015
Brassica rapa
Bra040015
N
0.786
Thhalv10021333m.g
Eutrema salsugineum
Thhalv10021333m.g
N
0.786
Bo1g147290
Brassica oleracea
Bo1g147290
N
0.770
cassava24109.valid.m1
Manihot esculenta
cassava24109.valid.m1
N
0.719
30005.m001261
Ricinus communis
30005.m001261
N
0.712
TCM_002550
Theobroma cacao
TCM_002550
N
0.694
Gorai.N001000
Gossypium raimondii
Gorai.N001000
N
0.694
MDP0000184998
Malus domestica
MDP0000184998
N
0.687
MDP0000716430
Malus domestica
MDP0000716430
N
0.687
POPTR_0014s17210
Populus trichocarpa
POPTR_0014s17210
N
0.683
PRUPE_ppa010592mg
Prunus persica
PRUPE_ppa010592mg
N
0.681
Pm007242
Prunus mume
Pm007242
N
0.681