ZKSCAN3 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000017875 T108152_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN3
M02923_2.00 		Homo sapiens
TCGAGGYTAGMCCA
TGGKCTARCCTCGA		 SELEX
Jolma et al.(2013)
ZNF306_1 		0.827 1.000
ZKSCAN3
M07696_2.00 		Homo sapiens
GGCTAGMCC
GGKCTAGCC		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN3.RCADE.OriginalMapping 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000030482 C2H2 ZF 314 336
ENSPTRP00000030482 C2H2 ZF 342 364
ENSPTRP00000030482 C2H2 ZF 370 392
ENSPTRP00000030482 C2H2 ZF 398 420
ENSPTRP00000030482 C2H2 ZF 426 448
ENSPTRP00000030482 C2H2 ZF 480 502
ENSPTRP00000030482 C2H2 ZF 508 530

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
dmd-3 Caenorhabditis elegans WBGene00012832 D 0.000
L892_g27879 Steinernema scapterisci L892_g27879 I 0.000
HPLM_0001382501 Haemonchus placei HPLM_0001382501 N 0.000
TCNE_0001625401 Toxocara canis TCNE_0001625401 N 0.000
TCLT_0000242201 Thelazia callipaeda TCLT_0000242201 N 0.000
SSTP_0000839900 Strongyloides stercoralis SSTP_0000839900 N 0.000
SSTP_0000731600 Strongyloides stercoralis SSTP_0000731600 N 0.000
SPAL_0001355700 Strongyloides papillosus SPAL_0001355700 N 0.000
SMUV_0001103601 Syphacia muris SMUV_0001103601 N 0.000
SMUV_0000467601 Syphacia muris SMUV_0000467601 N 0.000
RSKR_0000247700 Rhabditophanes kr3021 RSKR_0000247700 N 0.000
PTRK_0001116100 Parastrongyloides trichosuri PTRK_0001116100 N 0.000
PEQ_0000560001 Parascaris equorum PEQ_0000560001 N 0.000
NBR_0000071001 Nippostrongylus brasiliensis NBR_0000071001 N 0.000
L889_g14208 Steinernema feltiae L889_g14208 N 0.000
Bm6550 Brugia malayi Bm6550 N 0.000
Hba_18486 Heterorhabditis bacteriophora Hba_18486 N 0.000
EVEC_0001283901 Enterobius vermicularis EVEC_0001283901 N 0.000
DME_0000028701 Dracunculus medinensis DME_0000028701 N 0.000
ASU_15182 Ascaris suum ASU_15182 N 0.000
ANCCEY_01474 Ancylostoma ceylanicum ANCCEY_01474 N 0.000
ALUE_0001885601 Ascaris lumbricoides ALUE_0001885601 N 0.000
WBGene00242840 Onchocerca volvulus WBGene00242840 N 0.000
LOAG_13296 Loa loa LOAG_13296 N 0.000
CRE06043 Caenorhabditis remanei CRE06043 N 0.000
CBN07630 Caenorhabditis brenneri CBN07630 N 0.000
CBG05690 Caenorhabditis briggsae CBG05690 N 0.000