Prdm15 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000001620 T108867_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM15
M10222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM15_04 		0.822 0.970
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000041592 C2H2 ZF 376 398
ENSRNOP00000041592 C2H2 ZF 408 431
ENSRNOP00000041592 C2H2 ZF 442 462
ENSRNOP00000041592 C2H2 ZF 469 491
ENSRNOP00000041592 C2H2 ZF 496 518
ENSRNOP00000041592 C2H2 ZF 547 567
ENSRNOP00000041592 C2H2 ZF 572 594
ENSRNOP00000041592 C2H2 ZF 635 658
ENSRNOP00000041592 C2H2 ZF 665 685
ENSRNOP00000041592 C2H2 ZF 699 721
ENSRNOP00000041592 C2H2 ZF 727 749
ENSRNOP00000041592 C2H2 ZF 755 777
ENSRNOP00000041592 C2H2 ZF 783 805
ENSRNOP00000041592 C2H2 ZF 811 833
ENSRNOP00000041592 C2H2 ZF 839 862
ENSRNOP00000041592 C2H2 ZF 868 891

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla003087 Citrullus lanatus Cla003087 I
Cucsa.319840 Cucumis sativus Cucsa.319840 I
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N
Eucgr.J00513 Eucalyptus grandis Eucgr.J00513 N
Eucgr.J00512 Eucalyptus grandis Eucgr.J00512 N
Eucgr.J00511 Eucalyptus grandis Eucgr.J00511 N
Eucgr.J00509 Eucalyptus grandis Eucgr.J00509 N
Eucgr.J00508 Eucalyptus grandis Eucgr.J00508 N
Eucgr.J00505 Eucalyptus grandis Eucgr.J00505 N
Eucgr.I00587 Eucalyptus grandis Eucgr.I00587 N
Eucgr.I00583 Eucalyptus grandis Eucgr.I00583 N
Eucgr.C02446 Eucalyptus grandis Eucgr.C02446 N
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N
Eucgr.A02637 Eucalyptus grandis Eucgr.A02637 N
Eucgr.J00514 Eucalyptus grandis Eucgr.J00514 N
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N
mgf020234m Mimulus guttatus mgf020234m N
Cucsa.185760 Cucumis sativus Cucsa.185760 N
Cucsa.083530 Cucumis sativus Cucsa.083530 N
cassava3989.m1 Manihot esculenta cassava3989.m1 N
cassava15688.m1 Manihot esculenta cassava15688.m1 N
cassava14235.m1 Manihot esculenta cassava14235.m1 N
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N
MDP0000759504 Malus domestica MDP0000759504 N
LjSGA_014778.2 Lotus japonicus LjSGA_014778.2 N
PK29014.1 Cannabis sativa PK29014.1 N
PK27925.1 Cannabis sativa PK27925.1 N
SapurV1A.3648s0010 Salix purpurea SapurV1A.3648s0010 N
SapurV1A.0974s0010 Salix purpurea SapurV1A.0974s0010 N
SapurV1A.0630s0010 Salix purpurea SapurV1A.0630s0010 N
Pavir.J13106 Panicum virgatum Pavir.J13106 N
Pavir.Hb01808 Panicum virgatum Pavir.Hb01808 N
Pavir.Ha01768 Panicum virgatum Pavir.Ha01768 N
Pavir.Ea03745 Panicum virgatum Pavir.Ea03745 N
Pavir.Bb01366 Panicum virgatum Pavir.Bb01366 N
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N
30055.m001588 Ricinus communis 30055.m001588 N
MDP0000205938 Malus domestica MDP0000205938 N
MDP0000130797 Malus domestica MDP0000130797 N
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N
evm.TU.supercontig_104.98 Carica papaya evm.TU.supercontig_104.98 N
Eucgr.J00520 Eucalyptus grandis Eucgr.J00520 N
Eucgr.J00519 Eucalyptus grandis Eucgr.J00519 N
Eucgr.J00518 Eucalyptus grandis Eucgr.J00518 N
Eucgr.J00517 Eucalyptus grandis Eucgr.J00517 N
Eucgr.J00516 Eucalyptus grandis Eucgr.J00516 N
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N
ONIVA11G03690 Oryza nivara ONIVA11G03690 N
OMERI11G03230 Oryza meridionalis OMERI11G03230 N
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N
OGLUM11G03170 Oryza glumaepatula OGLUM11G03170 N
OBART12G03440 Oryza barthii OBART12G03440 N
OBART11G03530 Oryza barthii OBART11G03530 N
OB12G13350 Oryza brachyantha OB12G13350 N
OB11G12830 Oryza brachyantha OB11G12830 N
MTR_4g052620 Medicago truncatula MTR_4g052620 N
MTR_2g086690 Medicago truncatula MTR_2g086690 N
LPERR12G03220 Leersia perrieri LPERR12G03220 N
LPERR01G32790 Leersia perrieri LPERR01G32790 N
ONIVA12G03060 Oryza nivara ONIVA12G03060 N
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N
GRMZM2G439903 Zea mays GRMZM2G439903 N
GLYMA19G38211 Glycine max GLYMA19G38211 N
GLYMA13G39160 Glycine max GLYMA13G39160 N
GLYMA12G31150 Glycine max GLYMA12G31150 N
GLYMA12G09670 Glycine max GLYMA12G09670 N
GLYMA03G35570 Glycine max GLYMA03G35570 N
BGIOSGA037019 Oryza indica BGIOSGA037019 N
BGIOSGA034823 Oryza indica BGIOSGA034823 N
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N
Pm001403 Prunus mume Pm001403 N
Cla018691 Citrullus lanatus Cla018691 N
Cla008777 Citrullus lanatus Cla008777 N
Ca_15160 Cicer arietinum Ca_15160 N
TCM_041364 Theobroma cacao TCM_041364 N
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N
Solyc09g010160.1 Solanum lycopersicum Solyc09g010160.1 N
Si026707m.g Setaria italica Si026707m.g N
Si025833m.g Setaria italica Si025833m.g N
Si002586m.g Setaria italica Si002586m.g N
Sb05g003400 Sorghum bicolor Sb05g003400 N
AMTR_s00040p00117430 Amborella trichopoda AMTR_s00040p00117430 N
POPTR_0016s07690 Populus trichocarpa POPTR_0016s07690 N
POPTR_0009s02430 Populus trichocarpa POPTR_0009s02430 N
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N
OS12G0156100 Oryza sativa OS12G0156100 N
OS11G0154500 Oryza sativa OS11G0154500 N
ORUFI11G03420 Oryza rufipogon ORUFI11G03420 N
ORGLA12G0180300 Oryza glaberrima ORGLA12G0180300 N
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N
ORGLA11G0032800 Oryza glaberrima ORGLA11G0032800 N
OPUNC12G03240 Oryza punctata OPUNC12G03240 N
OPUNC11G03220 Oryza punctata OPUNC11G03220 N