Zfp398 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000006703 T108912_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF398
M07716_2.00 		Homo sapiens
CTSYYTCYYTCCCH
DGGGARRGARRSAG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF398.ChIP-seq.ReprocessedData 		0.804 0.962
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000008743 C2H2 ZF 344 365
ENSRNOP00000008743 C2H2 ZF 400 421
ENSRNOP00000008743 C2H2 ZF 428 450
ENSRNOP00000008743 C2H2 ZF 456 478
ENSRNOP00000008743 C2H2 ZF 484 506
ENSRNOP00000008743 C2H2 ZF 512 534
ENSRNOP00000008743 C2H2 ZF 540 562
ENSRNOP00000008743 C2H2 ZF 568 591

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Myb Drosophila melanogaster FBgn0002914 D
AAEL014286 Aedes aegypti AAEL014286 I
PPAI005590 Phlebotomus papatasi PPAI005590 I
LLOJ006683 Lutzomyia longipalpis LLOJ006683 I
AALB001524 Anopheles albimanus AALB001524 I
LCUP002256 Lucilia cuprina LCUP002256 I
Cflo_09641--XP_393231.3_APIME Camponotus floridanus Cflo_09641--XP_393231.3_APIME I
HMEL017165 Heliconius melpomene HMEL017165 I
GB44791 Apis mellifera GB44791 I
GE16012 Drosophila yakuba FBgn0233564 I
GK16252 Drosophila willistoni FBgn0218254 I
GJ18431 Drosophila virilis FBgn0205590 I
GD24674 Drosophila simulans FBgn0196001 I
GL24710 Drosophila persimilis FBgn0162298 I
CpipJ_CPIJ004862 Culex pipiens CpipJ_CPIJ004862 I
ADAC005010 Anopheles darlingi ADAC005010 I
CPIJ004862 Culex quinquefasciatus CPIJ004862 I
GF19984 Drosophila ananassae FBgn0096991 I
GM22518 Drosophila sechellia FBgn0177388 I
GH11855 Drosophila grimshawi FBgn0119334 I
GI14170 Drosophila mojavensis FBgn0136923 I
GG19364 Drosophila erecta FBgn0111568 I
ACUA005970 Anopheles culicifacies ACUA005970 N
ACYPI005393 Acyrthosiphon pisum ACYPI005393 N
ASTEI09594 Anopheles stephensi ASTEI09594 N
ASIS021966 Anopheles sinensis ASIS021966 N
AQUA000993 Anopheles quadriannulatus AQUA000993 N
AMIN006115 Anopheles minimus AMIN006115 N
AMEM015420 Anopheles merus AMEM015420 N
AMEC009973 Anopheles melas AMEC009973 N
AFUN003983 Anopheles funestus AFUN003983 N
AFAF000916 Anopheles farauti AFAF000916 N
AEPI008902 Anopheles epiroticus AEPI008902 N
ADIR011315 Anopheles dirus ADIR011315 N
ACOM030425 Anopheles coluzzii ACOM030425 N
ACHR001068 Anopheles christyi ACHR001068 N
AATE004999 Anopheles atroparvus AATE004999 N
AARA004970 Anopheles arabiensis AARA004970 N
AGAP008160 Anopheles gambiae AGAP008160 N
HHAL003965-PA Halyomorpha halys HHAL003965-PA N
PHUM518530 Pediculus humanus PHUM518530 N
NV17529 Nasonia vitripennis NV17529 N
L798_09102 Zootermopsis nevadensis L798_09102 N
KGM_15963 Danaus plexippus KGM_15963 N