CpipJ_CPIJ004862 (Culex pipiens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 CpipJ_CPIJ004862 T265677_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Myb
M03918_2.00 		Drosophila melanogaster
NRAWAACCGTTAVR
YBTAACGGTTWTYN		 SELEX
Nitta et al.(2015)
Myb_1 		0.683 0.734
Myb
M03919_2.00 		Drosophila melanogaster
YNTAACGGTHDNHH
DDNHDACCGTTANR		 SELEX
Nitta et al.(2015)
Myb_2 		0.683 0.734
Myb
M03920_2.00 		Drosophila melanogaster
NDAWWACCGTTACD
HGTAACGGTWWTHN		 SELEX
Nitta et al.(2015)
Myb_3 		0.683 0.734
Myb
M03921_2.00 		Drosophila melanogaster
DDDTDACCGTTACD
HGTAACGGTHAHHH		 SELEX
Nitta et al.(2015)
Myb_4 		0.683 0.734
Myb
M08215_2.00 		Drosophila melanogaster
MARYTGCAK
MTGCARYTK		 ChIP-seq
Contrino et al.(2012)
Mf27 		0.683 0.734
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ004862-RA Myb 19 64
CpipJ_CPIJ004862-RA Myb 70 116
CpipJ_CPIJ004862-RA Myb 122 167

Links

Other Myb/SANT family TFs
Other Culex pipiens TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CPIJ004862 Culex quinquefasciatus CPIJ004862 I 0.909
AAEL014286 Aedes aegypti AAEL014286 I 0.903
AGAP008160 Anopheles gambiae AGAP008160 N 0.852
AARA004970 Anopheles arabiensis AARA004970 N 0.852
ACHR001068 Anopheles christyi ACHR001068 N 0.852
ACOM030425 Anopheles coluzzii ACOM030425 N 0.852
AEPI008902 Anopheles epiroticus AEPI008902 N 0.852
AFUN003983 Anopheles funestus AFUN003983 N 0.852
AMEC009973 Anopheles melas AMEC009973 N 0.852
AMEM015420 Anopheles merus AMEM015420 N 0.852
AQUA000993 Anopheles quadriannulatus AQUA000993 N 0.852
ACUA005970 Anopheles culicifacies ACUA005970 N 0.850
AMIN006115 Anopheles minimus AMIN006115 N 0.850
ASTEI09594 Anopheles stephensi ASTEI09594 N 0.850
ADIR011315 Anopheles dirus ADIR011315 N 0.848
AALB001524 Anopheles albimanus AALB001524 I 0.836
ADAC005010 Anopheles darlingi ADAC005010 I 0.830
AFAF000916 Anopheles farauti AFAF000916 N 0.828
ASIS021966 Anopheles sinensis ASIS021966 N 0.811
AATE004999 Anopheles atroparvus AATE004999 N 0.807
PPAI005590 Phlebotomus papatasi PPAI005590 I 0.799
LLOJ006683 Lutzomyia longipalpis LLOJ006683 I 0.791
ACYPI005393 Acyrthosiphon pisum ACYPI005393 N 0.776
HMEL017165 Heliconius melpomene HMEL017165 I 0.773
L798_09102 Zootermopsis nevadensis L798_09102 N 0.755
KGM_15963 Danaus plexippus KGM_15963 N 0.753
AMEC012340 Anopheles melas AMEC012340 N 0.753
TC030738 Tribolium castaneum TC030738 N 0.751
GL24710 Drosophila persimilis FBgn0162298 I 0.744
BGIBMGA013826 Bombyx mori BGIBMGA013826 N 0.741
MDOA009261 Musca domestica MDOA009261 I 0.740
LCUP002256 Lucilia cuprina LCUP002256 I 0.734
PHUM518530 Pediculus humanus PHUM518530 N 0.733
GF19984 Drosophila ananassae FBgn0096991 I 0.722
GG19364 Drosophila erecta FBgn0111568 I 0.719
GE16012 Drosophila yakuba FBgn0233564 I 0.719
YQE_02334 Dendroctonus ponderosae YQE_02334 N 0.717
Cflo_09641--XP_393231.3_APIME Camponotus floridanus Cflo_09641--XP_393231.3_APIME I 0.715
NV17529 Nasonia vitripennis NV17529 N 0.712
GI14170 Drosophila mojavensis FBgn0136923 I 0.708
GJ18431 Drosophila virilis FBgn0205590 I 0.701
GM22518 Drosophila sechellia FBgn0177388 I 0.699
GD24674 Drosophila simulans FBgn0196001 I 0.699
GK16252 Drosophila willistoni FBgn0218254 I 0.698
GH11855 Drosophila grimshawi FBgn0119334 I 0.697
SMAR001262 Strigamia maritima SMAR001262 I 0.690
Myb Drosophila melanogaster FBgn0002914 D 0.683
GB44791 Apis mellifera GB44791 I 0.683
NEMVEDRAFT_v1g38726 Nematostella vectensis NEMVEDRAFT_v1g38726 I 0.683
CLEC001097 Cimex lectularius CLEC001097 N 0.680
mybl1.L Xenopus laevis XB-GENE-986561 I 0.675
HHAL003965-PA Halyomorpha halys HHAL003965-PA N 0.664