Zbtb48 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000009595 T108955_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB48
M08391_2.00 		Homo sapiens
HHDNTCCCTDR
YHAGGGANHDD		 ChIP-seq
Schmitges et al.(2016)
P10074.MEME 		0.827 0.996
ZBTB48
M08956_2.00 		Homo sapiens
BHBRVTCCCTDR
YHAGGGABYVDV		 Misc
Kulakovskiy et al.(2013)
ZBT48_HUMAN.H11MO.0.C 		0.827 0.996
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000012745 C2H2 ZF 286 308
ENSRNOP00000012745 C2H2 ZF 314 335
ENSRNOP00000012745 C2H2 ZF 345 367
ENSRNOP00000012745 C2H2 ZF 373 396
ENSRNOP00000012745 C2H2 ZF 431 454
ENSRNOP00000012745 C2H2 ZF 460 482
ENSRNOP00000012745 C2H2 ZF 488 510
ENSRNOP00000012745 C2H2 ZF 516 539
ENSRNOP00000012745 C2H2 ZF 545 567
ENSRNOP00000012745 C2H2 ZF 573 595

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BX914205.2 Danio rerio ENSDARG00000099590 N
FO834888.2 Danio rerio ENSDARG00000101994 N
CR352209.1 Danio rerio ENSDARG00000103972 N
ENSGACG00000014232 Gasterosteus aculeatus ENSGACG00000014232 N
ENSGACG00000015782 Gasterosteus aculeatus ENSGACG00000015782 N
ENSGACG00000018423 Gasterosteus aculeatus ENSGACG00000018423 N
ENSONIG00000000463 Oreochromis niloticus ENSONIG00000000463 N
ENSONIG00000007925 Oreochromis niloticus ENSONIG00000007925 N
ENSONIG00000009268 Oreochromis niloticus ENSONIG00000009268 N
ENSONIG00000010899 Oreochromis niloticus ENSONIG00000010899 N
ENSONIG00000017354 Oreochromis niloticus ENSONIG00000017354 N
ENSXMAG00000010532 Xiphophorus maculatus ENSXMAG00000010532 N
SMU15019363 Schmidtea mediterranea SMU15019363 N
SMU15036424 Schmidtea mediterranea SMU15036424 N
XP_002935373 Xenopus tropicalis XP_002935373 N
ECPE_0000661901 Echinostoma caproni ECPE_0000661901 N