CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15036424
(
Schmidtea mediterranea
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
SMU15036424
T055787_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15036424
Brinker
5
55
KRHAYEADFKLNAISHAVQHENRAAVREFNINESMVRKWRKQEDALCQVKK
Links
Other
Brinker
family TFs
Other
Schmidtea mediterranea
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMU15019363
Schmidtea mediterranea
SMU15019363
N
0.827
ECPE_0000661901
Echinostoma caproni
ECPE_0000661901
N
0.827
ENSXMAG00000010532
Xiphophorus maculatus
ENSXMAG00000010532
N
0.800
ENSGACG00000014232
Gasterosteus aculeatus
ENSGACG00000014232
N
0.788
ENSGACG00000015782
Gasterosteus aculeatus
ENSGACG00000015782
N
0.788
ENSGACG00000018423
Gasterosteus aculeatus
ENSGACG00000018423
N
0.788
XP_002935373
Xenopus tropicalis
XP_002935373
N
0.731
FO834888.2
Danio rerio
ENSDARG00000101994
N
0.725
ENSONIG00000000797
Oreochromis niloticus
ENSONIG00000000797
N
0.725
ENSONIG00000007925
Oreochromis niloticus
ENSONIG00000007925
N
0.725
BX914205.2
Danio rerio
ENSDARG00000099590
N
0.717
CR352209.1
Danio rerio
ENSDARG00000103972
N
0.717
ENSONIG00000017354
Oreochromis niloticus
ENSONIG00000017354
N
0.717
ENSONIG00000009268
Oreochromis niloticus
ENSONIG00000009268
N
0.706
ENSONIG00000010899
Oreochromis niloticus
ENSONIG00000010899
N
0.706