CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000004614
(
Sarcophilus harrisii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSHAG00000004614
T109862_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000005275
C2H2 ZF
506
528
FSCSVCANSFVDRHLLEKHMAVH
ENSSHAP00000005275
C2H2 ZF
536
558
FHCHYCSQSFKSEAAYRYHVSQH
ENSSHAP00000005275
C2H2 ZF
607
629
YSCKVCGKRFAHTSEFNYHRRIH
ENSSHAP00000005275
C2H2 ZF
635
657
YQCKVCHKFFRGRSTIKCHLKTH
ENSSHAP00000005275
C2H2 ZF
663
685
YRCTVCGHYSSTLNLMSKHITVH
Links
Other
C2H2 ZF
family TFs
Other
Sarcophilus harrisii
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf14574-augustus-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf14574-augustus-gene-0.4
N
0.000
augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0
N
0.000
augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0
N
0.000
maker-nMf.1.1.scaf00198-snap-gene-0.24
Meloidogyne floridensis
maker-nMf.1.1.scaf00198-snap-gene-0.24
N
0.000
maker-nMf.1.1.scaf03265-augustus-gene-0.7
Meloidogyne floridensis
maker-nMf.1.1.scaf03265-augustus-gene-0.7
N
0.000
maker-nMf.1.1.scaf04006-snap-gene-0.9
Meloidogyne floridensis
maker-nMf.1.1.scaf04006-snap-gene-0.9
N
0.000
maker-nMf.1.1.scaf06148-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf06148-augustus-gene-0.3
N
0.000
maker-nMf.1.1.scaf06196-snap-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf06196-snap-gene-0.8
N
0.000
maker-nMf.1.1.scaf08255-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf08255-snap-gene-0.4
N
0.000
maker-nMf.1.1.scaf11763-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf11763-augustus-gene-0.3
N
0.000
maker-nMf.1.1.scaf12853-augustus-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf12853-augustus-gene-0.4
N
0.000
augustus_masked-nMf.1.1.scaf03109-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf03109-processed-gene-0.1
N
0.000
maker-nMf.1.1.scaf15444-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf15444-snap-gene-0.4
N
0.000
maker-nMf.1.1.scaf16687-augustus-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf16687-augustus-gene-0.4
N
0.000
MhA1_Contig1386.frz3.gene10
Meloidogyne hapla
MhA1_Contig1386.frz3.gene10
N
0.000
MhA1_Contig2339.frz3.gene1
Meloidogyne hapla
MhA1_Contig2339.frz3.gene1
N
0.000
MhA1_Contig2339.frz3.gene2
Meloidogyne hapla
MhA1_Contig2339.frz3.gene2
N
0.000
MhA1_Contig41.frz3.gene12
Meloidogyne hapla
MhA1_Contig41.frz3.gene12
N
0.000
MhA1_Contig790.frz3.gene2
Meloidogyne hapla
MhA1_Contig790.frz3.gene2
N
0.000
MhA1_Contig790.frz3.gene5
Meloidogyne hapla
MhA1_Contig790.frz3.gene5
N
0.000
snap_masked-nMf.1.1.scaf04875-processed-gene-0.3
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf04875-processed-gene-0.3
N
0.000
Minc09143
Meloidogyne incognita
Minc09143
N
0.000
Minc02054
Meloidogyne incognita
Minc02054
N
0.000
Minc02055
Meloidogyne incognita
Minc02055
N
0.000
Minc03976
Meloidogyne incognita
Minc03976
N
0.000
Minc04725
Meloidogyne incognita
Minc04725
N
0.000
Minc07962
Meloidogyne incognita
Minc07962
N
0.000
Minc07964
Meloidogyne incognita
Minc07964
N
0.000
Minc08183
Meloidogyne incognita
Minc08183
N
0.000
Minc09138
Meloidogyne incognita
Minc09138
N
0.000
Minc09140
Meloidogyne incognita
Minc09140
N
0.000
Minc09142
Meloidogyne incognita
Minc09142
N
0.000
Minc02050
Meloidogyne incognita
Minc02050
N
0.000
Minc13321
Meloidogyne incognita
Minc13321
N
0.000
Minc13448
Meloidogyne incognita
Minc13448
N
0.000
Minc14854
Meloidogyne incognita
Minc14854
N
0.000
Minc15187
Meloidogyne incognita
Minc15187
N
0.000
Minc15189
Meloidogyne incognita
Minc15189
N
0.000
Minc17464
Meloidogyne incognita
Minc17464
N
0.000
Minc17667
Meloidogyne incognita
Minc17667
N
0.000
Minc18661
Meloidogyne incognita
Minc18661
N
0.000
Minc18991
Meloidogyne incognita
Minc18991
N
0.000