ZNF260 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000002930 T110189_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF260
M08395_2.00 		Homo sapiens
BYHBYNTHBYHYTCC
GGARDRVDANRVDRV		 ChIP-seq
Schmitges et al.(2016)
Q3ZCT1_9-13.RCADE 		0.776 0.946
ZNF260
M08959_2.00 		Homo sapiens
TTTWYAYDGYTGCATASTATTCCA
TGGAATASTATGCARCHRTRWAAA		 Misc
Kulakovskiy et al.(2013)
ZN260_HUMAN.H11MO.0.C 		0.776 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000003156 C2H2 ZF 24 46
ENSSSCP00000003156 C2H2 ZF 52 74
ENSSSCP00000003156 C2H2 ZF 80 102
ENSSSCP00000003156 C2H2 ZF 133 155
ENSSSCP00000003156 C2H2 ZF 161 183
ENSSSCP00000003156 C2H2 ZF 189 211
ENSSSCP00000003156 C2H2 ZF 217 239
ENSSSCP00000003156 C2H2 ZF 245 267
ENSSSCP00000003156 C2H2 ZF 273 295
ENSSSCP00000003156 C2H2 ZF 301 323
ENSSSCP00000003156 C2H2 ZF 329 351
ENSSSCP00000003156 C2H2 ZF 357 379
ENSSSCP00000003156 C2H2 ZF 385 407

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGTG_09159 Puccinia graminis PGTG_09159 D 0.000
PTTG_02951 Puccinia triticina PTTG_02951 I 0.000
AMAG_10934 Allomyces macrogynus AMAG_10934 I 0.000
PFL1_03021 Pseudozyma flocculosa PFL1_03021 I 0.000
PHACADRAFT_258404 Phanerochaete carnosa PHACADRAFT_258404 I 0.000
PHLGIDRAFT_76307 Phlebiopsis gigantea PHLGIDRAFT_76307 I 0.000
PHSY_000207 Pseudozyma hubeiensis PHSY_000207 I 0.000
PILCRDRAFT_94123 Piloderma croceum PILCRDRAFT_94123 I 0.000
PLEOSDRAFT_1083727 Pleurotus ostreatus PLEOSDRAFT_1083727 I 0.000
POSPLDRAFT_113058 Postia placenta POSPLDRAFT_113058 I 0.000
PSEUBRA_SCAF2g02944 Pseudozyma brasiliensis PSEUBRA_SCAF2g02944 I 0.000
PAXRUDRAFT_830673 Paxillus rubicundulus PAXRUDRAFT_830673 I 0.000
SCHCODRAFT_257622 Schizophyllum commune SCHCODRAFT_257622 I 0.000
SERLA73DRAFT_72478 Serpula lacrymans SERLA73DRAFT_72478 I 0.000
sr10662 Sporisorium reilianum sr10662 I 0.000
V565_004710 Rhizoctonia solani V565_004710 I 0.000
estExt_fgeneshMC_kg.C_60018 Mucor circinelloides estExt_fgeneshMC_kg.C_60018 I 0.000
fgeneshMC_pm.9_#_186 Mucor circinelloides fgeneshMC_pm.9_#_186 I 0.000
fgeneshPB_pg.22__185 Phycomyces blakesleeanus fgeneshPB_pg.22__185 I 0.000
fgeneshPB_pg.2__402 Phycomyces blakesleeanus fgeneshPB_pg.2__402 I 0.000
gw1.3.368.1 Heterobasidion annosum gw1.3.368.1 I 0.000
GLOINDRAFT_38994 Rhizophagus irregularis GLOINDRAFT_38994 I 0.000
AMAG_11531 Allomyces macrogynus AMAG_11531 I 0.000
RO3G_08081 Rhizopus oryzae RO3G_08081 I 0.000
SPPG_09179 Spizellomyces punctatus SPPG_09179 I 0.000
AGABI2DRAFT_221018 Agaricus bisporus AGABI2DRAFT_221018 I 0.000
BN946_scf184656.g9 Trametes cinnabarina BN946_scf184656.g9 I 0.000
CC1G_03210 Coprinopsis cinerea CC1G_03210 I 0.000
CERSUDRAFT_154783 Ceriporiopsis subvermispora CERSUDRAFT_154783 I 0.000
CY34DRAFT_590075 Suillus luteus CY34DRAFT_590075 I 0.000
GALMADRAFT_535775 Galerina marginata GALMADRAFT_535775 I 0.000
PaG_02922 Pseudozyma aphidis PaG_02922 I 0.000
HETIRDRAFT_245864 Heterobasidion irregulare HETIRDRAFT_245864 I 0.000
K443DRAFT_671242 Laccaria amethystina K443DRAFT_671242 I 0.000
LACBIDRAFT_399488 Laccaria bicolor LACBIDRAFT_399488 I 0.000
M378DRAFT_10526 Amanita muscaria M378DRAFT_10526 I 0.000
M413DRAFT_24478 Hebeloma cylindrosporum M413DRAFT_24478 I 0.000
MELLADRAFT_118331 Melampsora laricipopulina MELLADRAFT_118331 I 0.000
GLOTRDRAFT_137651 Gloeophyllum trabeum GLOTRDRAFT_137651 N 0.000
FOMPIDRAFT_1127908 Fomitopsis pinicola FOMPIDRAFT_1127908 N 0.000
JAAARDRAFT_35522 Jaapia argillacea JAAARDRAFT_35522 N 0.000
PIIN_00063 Piriformospora indica PIIN_00063 N 0.000
UHOR_02856 Ustilago hordei UHOR_02856 N 0.000
M408DRAFT_175095 Serendipita vermifera M408DRAFT_175095 N 0.000