ZNF558 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000029035 T110589_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF558
M07620_2.00 		Homo sapiens
HKGRAYHTGTRGRTKBATRYCTTYCAK
MTGRAAGRYATVMAYCYACADRTYCMD		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF558.RCADE.ReprocessedData 		0.820 0.951
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000022926 C2H2 ZF 155 176
ENSSSCP00000022926 C2H2 ZF 182 204
ENSSSCP00000022926 C2H2 ZF 210 232
ENSSSCP00000022926 C2H2 ZF 238 260
ENSSSCP00000022926 C2H2 ZF 266 288
ENSSSCP00000022926 C2H2 ZF 294 316
ENSSSCP00000022926 C2H2 ZF 322 344
ENSSSCP00000022926 C2H2 ZF 350 372
ENSSSCP00000022926 C2H2 ZF 378 400

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0012s13880 Populus trichocarpa POPTR_0012s13880 N
POPTR_0015s13840 Populus trichocarpa POPTR_0015s13840 N
cassava21336.m1 Manihot esculenta cassava21336.m1 N
Ciclev10005869m.g Citrus clementina Ciclev10005869m.g N
Lus10027413.g Linum usitatissimum Lus10027413.g N
Lus10031652.g Linum usitatissimum Lus10031652.g N
orange1.1g028004m.g Citrus sinensis orange1.1g028004m.g N
SapurV1A.0068s0570 Salix purpurea SapurV1A.0068s0570 N