ZNF558 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000029035 T110589_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF558
M07620_2.00 		Homo sapiens
HKGRAYHTGTRGRTKBATRYCTTYCAK
MTGRAAGRYATVMAYCYACADRTYCMD		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF558.RCADE.ReprocessedData 		0.820 0.951
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000022926 C2H2 ZF 155 176
ENSSSCP00000022926 C2H2 ZF 182 204
ENSSSCP00000022926 C2H2 ZF 210 232
ENSSSCP00000022926 C2H2 ZF 238 260
ENSSSCP00000022926 C2H2 ZF 266 288
ENSSSCP00000022926 C2H2 ZF 294 316
ENSSSCP00000022926 C2H2 ZF 322 344
ENSSSCP00000022926 C2H2 ZF 350 372
ENSSSCP00000022926 C2H2 ZF 378 400

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF558 Bos taurus ENSBTAG00000030929 I 0.827
ENSP00000404065-D15 Bos grunniens ENSP00000404065-D15 I 0.827
ENSAMEG00000008173 Ailuropoda melanoleuca ENSAMEG00000008173 I 0.826
ZNF558 Equus caballus ENSECAG00000012836 I 0.826
ZNF558 Canis familiaris ENSCAFG00000030395 I 0.825
ENSMPUG00000008460 Mustela putorius furo ENSMPUG00000008460 I 0.825
ZNF558 Vicugna pacos ENSVPAG00000010290 I 0.825
ENSCSAG00000007844 Chlorocebus sabaeus ENSCSAG00000007844 I 0.822
ZNF557 Macaca mulatta ENSMMUG00000019966 I 0.822
ENSNLEG00000011956 Nomascus leucogenys ENSNLEG00000011956 I 0.822
ZNF558 Otolemur garnettii ENSOGAG00000008204 I 0.822
ENSPANG00000011044 Papio anubis ENSPANG00000011044 I 0.822
ENSPPYG00000009513 Pongo abelii ENSPPYG00000009513 I 0.822
ENSSTOG00000002432 Ictidomys tridecemlineatus ENSSTOG00000002432 I 0.822
ENSP00000410703 Macaca fascicularis ENSP00000410703 I 0.822
ZNF558 Tursiops truncatus ENSTTRG00000014447 I 0.821
ZNF558 Callithrix jacchus ENSCJAG00000011049 I 0.820
ZNF558 Homo sapiens ENSG00000167785 D 0.820
ZNF558 Gorilla gorilla ENSGGOG00000006642 I 0.820
ZNF558 Pan troglodytes ENSPTRG00000010432 I 0.820
ZNF558 Cavia porcellus ENSCPOG00000009453 I 0.819
ZNF558 Pteropus vampyrus ENSPVAG00000001544 I 0.819
Zfp558 Mus musculus ENSMUSG00000074500 I 0.785
ENSTSYG00000001297 Tarsius syrichta ENSTSYG00000001297 I 0.762