ZNF558 (Cavia porcellus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCPOG00000009453 T089897_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF558
M07620_2.00 		Homo sapiens
HKGRAYHTGTRGRTKBATRYCTTYCAK
MTGRAAGRYATVMAYCYACADRTYCMD		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF558.RCADE.ReprocessedData 		0.824 0.966
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000008486 C2H2 ZF 73 94
ENSCPOP00000008486 C2H2 ZF 100 122
ENSCPOP00000008486 C2H2 ZF 128 150
ENSCPOP00000008486 C2H2 ZF 156 178
ENSCPOP00000008486 C2H2 ZF 184 206
ENSCPOP00000008486 C2H2 ZF 212 234
ENSCPOP00000008486 C2H2 ZF 240 262
ENSCPOP00000008486 C2H2 ZF 268 290
ENSCPOP00000008486 C2H2 ZF 296 318

Links

Other C2H2 ZF family TFs
Other Cavia porcellus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000007844 Chlorocebus sabaeus ENSCSAG00000007844 I 0.825
ZNF557 Macaca mulatta ENSMMUG00000019966 I 0.825
ENSNLEG00000011956 Nomascus leucogenys ENSNLEG00000011956 I 0.825
ZNF558 Otolemur garnettii ENSOGAG00000008204 I 0.825
ENSPANG00000011044 Papio anubis ENSPANG00000011044 I 0.825
ENSPPYG00000009513 Pongo abelii ENSPPYG00000009513 I 0.825
ENSSTOG00000002432 Ictidomys tridecemlineatus ENSSTOG00000002432 I 0.825
ENSP00000410703 Macaca fascicularis ENSP00000410703 I 0.825
ZNF558 Callithrix jacchus ENSCJAG00000011049 I 0.824
ZNF558 Homo sapiens ENSG00000167785 D 0.824
ZNF558 Gorilla gorilla ENSGGOG00000006642 I 0.824
ZNF558 Pan troglodytes ENSPTRG00000010432 I 0.824
ENSAMEG00000008173 Ailuropoda melanoleuca ENSAMEG00000008173 I 0.820
ZNF558 Canis familiaris ENSCAFG00000030395 I 0.820
ZNF558 Equus caballus ENSECAG00000012836 I 0.820
ZNF558 Bos taurus ENSBTAG00000030929 I 0.819
ENSMPUG00000008460 Mustela putorius furo ENSMPUG00000008460 I 0.819
ZNF558 Sus scrofa ENSSSCG00000029035 I 0.819
ENSP00000404065-D15 Bos grunniens ENSP00000404065-D15 I 0.819
ZNF558 Vicugna pacos ENSVPAG00000010290 I 0.817
ZNF558 Tursiops truncatus ENSTTRG00000014447 I 0.814
ZNF558 Pteropus vampyrus ENSPVAG00000001544 I 0.813
Zfp558 Mus musculus ENSMUSG00000074500 I 0.786
ENSTSYG00000001297 Tarsius syrichta ENSTSYG00000001297 I 0.766