CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PRDM6
(
Taeniopygia guttata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTGUG00000001115
T111342_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000001146
C2H2 ZF
450
471
WKCGQCFKTFTQRILLQMHVCT
ENSTGUP00000001146
C2H2 ZF
478
500
YQCGHCSQSFSQPSELRNHVVTH
ENSTGUP00000001146
C2H2 ZF
506
528
FKCGYCGRAFAGATTLNNHIRTH
Links
Other
C2H2 ZF
family TFs
Other
Taeniopygia guttata
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRDM6
Callithrix jacchus
ENSCJAG00000017318
I
0.827
ENSPFOG00000000918
Poecilia formosa
ENSPFOG00000000918
I
0.821
ENSLACG00000003287
Latimeria chalumnae
ENSLACG00000003287
N
0.827
PRDM6
Procavia capensis
ENSPCAG00000007467
N
0.827
Aan_R002291
Calypte anna
Aan_R002291
N
0.827
Afo_R013833
Aptenodytes forsteri
Afo_R013833
N
0.827
Cmyd_10008583
Chelonia mydas
Cmyd_10008583
N
0.827
Gfo_R011707
Geospiza fortis
Gfo_R011707
N
0.827
Tal_R005602
Tyto alba
Tal_R005602
N
0.827